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    ANS3 leucoanthocyanidin dioxygenase [ Glycine max (soybean) ]

    Gene ID: 100801148, updated on 18-Aug-2023

    Summary

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    Gene symbol
    ANS3
    Gene description
    leucoanthocyanidin dioxygenase
    Locus tag
    GLYMA_11G027700v4
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    Also known as
    ANS
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    Genomic context

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    See ANS3 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 11 NC_038247.2 (1987580..1988882)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 11 NC_038247.1 (1992164..1993466)

    Chromosome 11 - NC_038247.2Genomic Context describing neighboring genes Neighboring gene protein FIZZY-RELATED 2 Neighboring gene expansin-A7 Neighboring gene uncharacterized LOC100798851 Neighboring gene 30-kDa cleavage and polyadenylation specificity factor 30

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Methylation affects transposition and splicing of a large CACTA transposon from a MYB transcription factor regulating anthocyanin synthase genes in soybean seed coats. Zabala G, et al. PLoS One, 2014. PMID 25369033, Free PMC Article
    2. Transcriptomic variation in proanthocyanidin biosynthesis pathway genes in soybean (Glycine spp.). Ha J, et al. J Sci Food Agric, 2018 Apr. PMID 28960323

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    leucoanthocyanidin dioxygenase
    Names
    anthocyanidin synthase
    NP_001240884.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001253955.2 → NP_001240884.1  leucoanthocyanidin dioxygenase

      See identical proteins and their annotated locations for NP_001240884.1

      Status: PROVISIONAL

      Source sequence(s)
      BT094457
      UniProtKB/TrEMBL
      B0FLP4, Q2TUW0
      Conserved Domains (1) summary
      PLN03178
      Location:1 → 348
      PLN03178; leucoanthocyanidin dioxygenase; Provisional

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038247.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      1987580..1988882
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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