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    LOC100789256 protein GRAVITROPIC IN THE LIGHT 1 [ Glycine max (soybean) ]

    Gene ID: 100789256, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100789256
    Gene description
    protein GRAVITROPIC IN THE LIGHT 1
    Locus tag
    GLYMA_08G334700v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100789256 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 8 NC_038244.2 (44573248..44576682)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 8 NC_038244.1 (45198378..45201823)

    Chromosome 8 - NC_038244.2Genomic Context describing neighboring genes Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene uncharacterized LOC100306349 Neighboring gene mitochondrial uncoupling protein 2 Neighboring gene microRNA MIR5785

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative gravitropism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to red or far red light IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein GRAVITROPIC IN THE LIGHT 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038244.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      44573248..44576682
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014779457.3 → XP_014634943.1  protein GRAVITROPIC IN THE LIGHT 1

      UniProtKB/TrEMBL
      A0A0R0EX61, I1KYU1
      Conserved Domains (1) summary
      pfam04859
      Location:73 → 212
      DUF641; Plant protein of unknown function (DUF641)
    Nucleotide Protein
    Heading Accession and Version

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