U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC100788923 protein S-acyltransferase 24 [ Glycine max (soybean) ]

    Gene ID: 100788923, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC100788923
    Gene description
    protein S-acyltransferase 24
    Locus tag
    GLYMA_17G107500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC100788923 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 17 NC_038253.2 (8439561..8447678, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 17 NC_038253.1 (8442405..8450533, complement)

    Chromosome 17 - NC_038253.2Genomic Context describing neighboring genes Neighboring gene protein PHOX1 Neighboring gene dynein regulatory complex subunit 6 Neighboring gene uncharacterized LOC100789450 Neighboring gene triphosphate tunnel metalloenzyme 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein palmitoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein S-acyltransferase 24

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038253.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      8439561..8447678 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041011148.1 → XP_040867082.1  protein S-acyltransferase 24 isoform X1

      UniProtKB/TrEMBL
      A0A0R0H1Q3
      Conserved Domains (3) summary
      PHA03095
      Location:34 → 253
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:57 → 88
      ANK; ANK repeat [structural motif]
      cl19890
      Location:267 → 507
      DHHC; DHHC palmitoyltransferase

    2. XM_003549669.5 → XP_003549717.1  protein S-acyltransferase 24 isoform X2

      UniProtKB/TrEMBL
      A0A0R0H1Q3, I1MU18
      Conserved Domains (4) summary
      PHA03095
      Location:34 → 245
      PHA03095; ankyrin-like protein; Provisional
      sd00045
      Location:57 → 88
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:129 → 214
      Ank_2; Ankyrin repeats (3 copies)
      cl19890
      Location:259 → 521
      DHHC; DHHC palmitoyltransferase

    3. XM_041011149.1 → XP_040867083.1  protein S-acyltransferase 24 isoform X3

      UniProtKB/TrEMBL
      K7M065
      Conserved Domains (3) summary
      COG0666
      Location:2 → 161
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:36 → 67
      ANK; ANK repeat [structural motif]
      cl19890
      Location:146 → 386
      DHHC; DHHC palmitoyltransferase
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.