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    LOC100785344 pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial [ Glycine max (soybean) ]

    Gene ID: 100785344, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100785344
    Gene description
    pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial
    Locus tag
    GLYMA_15G188500v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100785344 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 15 NC_038251.2 (20475404..20479466, complement)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 15 NC_038251.1 (19714447..19718484, complement)

    Chromosome 15 - NC_038251.2Genomic Context describing neighboring genes Neighboring gene NADH-ubiquinone oxidoreductase chain 5-like Neighboring gene DNA polymerase Neighboring gene uncharacterized LOC106796113 Neighboring gene uncharacterized LOC100500240

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the catalytic mechanism of pyruvate dehydrogenase kinase. Tovar-Méndez A, et al. Arch Biochem Biophys, 2005 Feb 1. PMID 15629119
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pyruvate dehydrogenase (acetyl-transferring) kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial
    Names
    mitochondrial pyruvate dehydrogenase kinase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038251.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      20475404..20479466 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003546497.5 → XP_003546545.1  pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial

      See identical proteins and their annotated locations for XP_003546545.1

      UniProtKB/TrEMBL
      C6TCU2, Q6PP98
      Conserved Domains (2) summary
      cd16929
      Location:193 → 359
      HATPase_PDK-like; Histidine kinase-like ATPase domain of pyruvate dehydrogenase kinase, branched-chain alpha-ketoacid dehydrogenase kinase and related domains
      pfam10436
      Location:28 → 189
      BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
    Nucleotide Protein
    Heading Accession and Version

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