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    LOC100784000 protein transport protein SEC23 [ Glycine max (soybean) ]

    Gene ID: 100784000, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100784000
    Gene description
    protein transport protein SEC23
    Locus tag
    GLYMA_18G001400v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Glycine max
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
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    Genomic context

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    See LOC100784000 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    104 current Glycine_max_v4.0 (GCF_000004515.6) 18 NC_038254.2 (134366..136969)
    103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 18 NC_038254.1 (134932..137526)

    Chromosome 18 - NC_038254.2Genomic Context describing neighboring genes Neighboring gene gibberellin-regulated protein 12-like Neighboring gene purple acid phosphatase 15 Neighboring gene TBC domain-containing protein C1952.17c Neighboring gene transfer RNA tyrosine (anticodon GUA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in COPII-coated vesicle budding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in COPII-coated vesicle cargo loading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of COPII vesicle coat IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein transport protein SEC23

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Glycine_max_v4.0 Primary Assembly

    Genomic

    1. NC_038254.2 Reference Glycine_max_v4.0 Primary Assembly

      Range
      134366..136969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003551898.5 → XP_003551946.1  protein transport protein SEC23

      See identical proteins and their annotated locations for XP_003551946.1

      UniProtKB/TrEMBL
      I1MY92
      Conserved Domains (1) summary
      PLN00162
      Location:1 → 730
      PLN00162; transport protein sec23; Provisional
    Nucleotide Protein
    Heading Accession and Version

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