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    LOC100638485 plasminogen activator inhibitor 1 RNA-binding protein-like [ Amphimedon queenslandica ]

    Gene ID: 100638485, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC100638485
    Gene description
    plasminogen activator inhibitor 1 RNA-binding protein-like
    See related
    EnsemblRapid:LOC100638485
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Amphimedon queenslandica
    Lineage
    Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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    Genomic context

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    See LOC100638485 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546817.1 (21589..24012)

    NW_003546817.1Genomic Context describing neighboring genes Neighboring gene ribonucleoside-diphosphate reductase subunit M2 B-like Neighboring gene ras-related protein Rab-3-like Neighboring gene dynein heavy chain 8, axonemal Neighboring gene terminal uridylyltransferase 4-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003546817.1 Unplaced Scaffold Reference v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasminogen activator inhibitor 1 RNA-binding protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference v1.0 Primary Assembly

    Genomic

    1. NW_003546817.1 Reference v1.0 Primary Assembly

      Range
      21589..24012
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011408524.2 → XP_011406826.2  plasminogen activator inhibitor 1 RNA-binding protein-like

      UniProtKB/TrEMBL
      A0A1X7TTK2
      Related
      XP_011406826.2, XM_011408524.2
      Conserved Domains (2) summary
      pfam04774
      Location:229 → 353
      HABP4_PAI-RBP1; Hyaluronan / mRNA binding family
      cl28310
      Location:19 → 194
      Rho; Transcription termination factor Rho [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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