U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    cenatac centrosomal AT-AC [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495410, updated on 4-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    cenatacprovided by Xenbase
    Official Full Name
    centrosomal AT-ACprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-923273
    See related
    Ensembl:ENSXETG00000010071 AllianceGenome:Xenbase:XB-GENE-923273
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    ccdc84
    Summary
    Human ortholog(s) of this gene implicated in mosaic variegated aneuploidy syndrome 4. Orthologous to human CENATAC (centrosomal AT-AC splicing factor). [provided by Alliance of Genome Resources, Jan 2025]
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See cenatac in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (80963715..80981204)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (85231247..85249091, complement)

    Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene B cell CLL/lymphoma 9 like Neighboring gene uroplakin 2 Neighboring gene ribosomal protein S25 Neighboring gene trafficking protein particle complex subunit 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    coiled-coil domain-containing protein 84
    Names
    coiled-coil domain containing 84

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      80963715..80981204
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004916061.4 → XP_004916118.2  coiled-coil domain-containing protein 84 isoform X1

      UniProtKB/TrEMBL
      A0A5S6LDR9, A0A8J0R629
      Conserved Domains (1) summary
      pfam14968
      Location:6 → 302
      CCDC84; Coiled coil protein 84

    2. XM_004916063.4 → XP_004916120.2  coiled-coil domain-containing protein 84 isoform X3

      UniProtKB/TrEMBL
      A0A5S6LDR9, A0A6I8QBK3
      Related
      ENSXETP00000066778.2, ENSXETT00000074364.2
      Conserved Domains (1) summary
      pfam14968
      Location:6 → 284
      CCDC84; Coiled coil protein 84

    3. XM_012967015.3 → XP_012822469.2  coiled-coil domain-containing protein 84 isoform X7

      UniProtKB/TrEMBL
      A0A5S6LDR9, A0A8J0SJA6
      Conserved Domains (1) summary
      pfam14968
      Location:6 → 297
      CCDC84; Coiled coil protein 84

    4. XM_004916062.4 → XP_004916119.2  coiled-coil domain-containing protein 84 isoform X2

      UniProtKB/TrEMBL
      A0A6I8T0W0, F6SA87
      Related
      ENSXETP00000100420.2, ENSXETT00000073280.2
      Conserved Domains (1) summary
      pfam14968
      Location:6 → 349
      CCDC84; Coiled coil protein 84

    5. XM_002932925.5 → XP_002932971.3  coiled-coil domain-containing protein 84 isoform X4

      UniProtKB/TrEMBL
      A0A8J0QLI0, F6SA87
      Conserved Domains (1) summary
      pfam14968
      Location:6 → 331
      CCDC84; Coiled coil protein 84

    6. XM_031906650.1 → XP_031762510.1  coiled-coil domain-containing protein 84 isoform X5

      UniProtKB/TrEMBL
      A0A5S6LDR9, A0A8J1JZU5
      Conserved Domains (1) summary
      pfam14968
      Location:2 → 263
      CCDC84; Coiled coil protein 84

    7. XM_031906651.1 → XP_031762511.1  coiled-coil domain-containing protein 84 isoform X6

      UniProtKB/TrEMBL
      A0A5S6LDR9, A0A8J1K1D6
      Conserved Domains (1) summary
      pfam14968
      Location:1 → 256
      CCDC84; Coiled coil protein 84
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.