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    LOC100491133 tyrosine-protein kinase SRK3 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100491133, updated on 9-Dec-2024

    Summary

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    Official Symbol
    LOC100491133provided by Xenbase
    Official Full Name
    tyrosine-protein kinase SRK3provided by Xenbase
    Primary source
    Xenbase:XB-GENE-29080539
    See related
    AllianceGenome:Xenbase:XB-GENE-29080539
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Summary
    Predicted to enable ATP binding activity; protein kinase activity; and zinc ion binding activity. Predicted to act upstream of or within protein phosphorylation. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See LOC100491133 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 10 NC_030686.2 (1913382..1924746)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 10 NC_030686.1 (494521..527526, complement)

    Chromosome 10 - NC_030686.2Genomic Context describing neighboring genes Neighboring gene tyrosine-protein kinase Srms Neighboring gene tyrosine-protein kinase Srms-like Neighboring gene probable E3 ubiquitin-protein ligase TRIM8 Neighboring gene protein tyrosine kinase 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    tyrosine-protein kinase SRK3
    Names
    tyrosine-protein kinase Lyn

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030686.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      1913382..1924746
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_031894581.1 → XP_031750441.1  tyrosine-protein kinase SRK3

      UniProtKB/TrEMBL
      A0A8J1J135
      Conserved Domains (3) summary
      cd16609
      Location:10 → 56
      RING-HC_TRIM65_C-IV; RING finger, HC subclass, found in tripartite motif-containing protein TRIM65 and similar proteins
      cd19769
      Location:94 → 139
      Bbox2_TRIM16-like; B-box-type 2 zinc finger found in tripartite motif-containing proteins, TRIM16, TRIM29, TRIM47 and similar proteins
      cl21453
      Location:196 → 463
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein Strain
    Heading Accession and Version

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