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    TP53BP1 tumor protein p53 binding protein 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100461921, updated on 3-Dec-2024

    Summary

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    Gene symbol
    TP53BP1
    Gene description
    tumor protein p53 binding protein 1
    Locus tag
    CR201_G0045982
    See related
    Ensembl:ENSPPYG00000006414
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human mouse all
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    Genomic context

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    See TP53BP1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 16 NC_072001.2 (46330632..46429831, complement)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 15 NC_072000.1 (43610235..43709493, complement)

    Chromosome 16 - NC_072001.2Genomic Context describing neighboring genes Neighboring gene leucine carboxyl methyltransferase 2 Neighboring gene N6-Methyl-AMP deaminase Neighboring gene zinc finger and SCAN domain containing 29 Neighboring gene tubulin gamma complex component 4 Neighboring gene microtubule associated protein 1A Neighboring gene diphosphoinositol pentakisphosphate kinase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA damage checkpoint signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    TP53-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_072001.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      46330632..46429831 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063716600.1 → XP_063572670.1  TP53-binding protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    2. XM_054532696.2 → XP_054388671.1  TP53-binding protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    3. XM_024232798.3 → XP_024088566.2  TP53-binding protein 1 isoform X4

      UniProtKB/TrEMBL
      A0A2J8S597

    4. XM_063716603.1 → XP_063572673.1  TP53-binding protein 1 isoform X13

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    5. XM_063716601.1 → XP_063572671.1  TP53-binding protein 1 isoform X10

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    6. XM_054532699.2 → XP_054388674.1  TP53-binding protein 1 isoform X11

      UniProtKB/TrEMBL
      A0A2J8S596

    7. XM_009249773.4 → XP_009248048.3  TP53-binding protein 1 isoform X6

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    8. XM_054532695.2 → XP_054388670.1  TP53-binding protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    9. XM_054532694.2 → XP_054388669.1  TP53-binding protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    10. XM_063716602.1 → XP_063572672.1  TP53-binding protein 1 isoform X12

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    11. XM_054532697.2 → XP_054388672.1  TP53-binding protein 1 isoform X7

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    12. XM_054532698.2 → XP_054388673.1  TP53-binding protein 1 isoform X9

      UniProtKB/TrEMBL
      A0A2J8S596

    13. XM_054532693.2 → XP_054388668.1  TP53-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    14. XM_063716604.1 → XP_063572674.1  TP53-binding protein 1 isoform X14

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    15. XM_063716605.1 → XP_063572675.1  TP53-binding protein 1 isoform X15

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    16. XM_063716606.1 → XP_063572676.1  TP53-binding protein 1 isoform X16

      UniProtKB/TrEMBL
      A0A2J8S586, H2NN14

    RNA

    1. XR_008514108.1 RNA Sequence

    2. XR_010137460.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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