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    HIGD2AP1 HIGD2A pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100289360, updated on 10-Dec-2024

    Summary

    Official Symbol
    HIGD2AP1provided by HGNC
    Official Full Name
    HIGD2A pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:54793
    See related
    Ensembl:ENSG00000230047 AllianceGenome:HGNC:54793
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See HIGD2AP1 in Genome Data Viewer
    Location:
    2q37.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (231437109..231437421, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (231921550..231921862, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (232301820..232302132, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12426 Neighboring gene uncharacterized LOC124907997 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr2:232278424-232279184 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232279185-232279944 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:232283151-232283652 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:232285114-232285614 Neighboring gene zinc finger and BTB domain containing 8 opposite strand pseudogene 2 Neighboring gene Sharpr-MPRA regulatory region 5541 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17284 Neighboring gene Sharpr-MPRA regulatory region 11632 Neighboring gene small nucleolar RNA, H/ACA box 75 Neighboring gene nucleolin Neighboring gene small nucleolar RNA, C/D box 20

    Genomic regions, transcripts, and products

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_030143.1 

      Range
      101..413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      231437109..231437421 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      231921550..231921862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)