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    LOC100245274 cinnamate beta-D-glucosyltransferase-like [ Vitis vinifera (wine grape) ]

    Gene ID: 100245274, updated on 23-Oct-2023

    Summary

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    Gene symbol
    LOC100245274
    Gene description
    cinnamate beta-D-glucosyltransferase-like
    Locus tag
    VIT_00003157001
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
    Also known as
    GT2; RGT
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    Genomic context

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    See LOC100245274 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 3 NC_081807.1 (6100426..6102370, complement)
    102 previous assembly 12X (GCF_000003745.3) 3 NC_012009.3 (6124439..6126235, complement)

    Chromosome 3 - NC_081807.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100250399 Neighboring gene uncharacterized LOC109122368 Neighboring gene uncharacterized LOC104878819 Neighboring gene transcription factor MYB44 Neighboring gene uncharacterized LOC100247075

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification and functional characterization of cDNAs coding for hydroxybenzoate/hydroxycinnamate glucosyltransferases co-expressed with genes related to proanthocyanidin biosynthesis. Khater F, et al. J Exp Bot, 2012 Feb. PMID 22090445, Free PMC Article
    2. A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. Velasco R, et al. PLoS One, 2007 Dec 19. PMID 18094749, Free PMC Article
    3. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glycosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gallate 1-beta-glucosyltransferase 84A24
    Names
    glucosyltransferase
    resveratrol glycosyltransferase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081807.1 Reference ASM3070453v1 Primary Assembly

      Range
      6100426..6102370 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002285343.4 → XP_002285379.1  gallate 1-beta-glucosyltransferase 84A24

      See identical proteins and their annotated locations for XP_002285379.1

      UniProtKB/TrEMBL
      A0A438FN41, A5ATH4, G9FKG7
      Conserved Domains (2) summary
      PLN02555
      Location:1 → 478
      PLN02555; limonoid glucosyltransferase
      COG1819
      Location:9 → 435
      YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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