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    LOC100216935 uncharacterized LOC100216935 [ Zea mays ]

    Gene ID: 100216935, updated on 27-Nov-2024

    Summary

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    Gene symbol
    LOC100216935
    Gene description
    uncharacterized LOC100216935
    Locus tag
    ZEAMMB73_Zm00001d000242
    See related
    EnsemblRapid:Zm00001eb292400
    Gene type
    protein coding
    RefSeq status
    PREDICTED
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G033406
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    Genomic context

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    See LOC100216935 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 6 NC_050101.1 (169327246..169327814)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) Unplaced Scaffold NW_017972012.1 (52318..52886, complement)

    Chromosome 6 - NC_050101.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100284420 Neighboring gene signal recognition particle 54 kDa protein 2 Neighboring gene uncharacterized LOC100274237 Neighboring gene uncharacterized LOC100283439 Neighboring gene uncharacterized LOC100275527

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The B73 maize genome: complexity, diversity, and dynamics. Schnable PS, et al. Science, 2009 Nov 20. PMID 19965430
    2. Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. Soderlund C, et al. PLoS Genet, 2009 Nov. PMID 19936069, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100216935

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001143319.1 → NP_001136791.1  uncharacterized protein LOC100216935

      See identical proteins and their annotated locations for NP_001136791.1

      Status: PREDICTED

      Source sequence(s)
      BT037636
      UniProtKB/TrEMBL
      A0A3L6EE21, B4FKJ8
      Related
      Zm00001eb292400_P001, Zm00001eb292400_T001
      Conserved Domains (1) summary
      pfam07911
      Location:3 → 88
      DUF1677; Protein of unknown function (DUF1677)

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050101.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      169327246..169327814
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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