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    GTPBP1 GTP binding protein 1 [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100173025, updated on 3-Dec-2024

    Summary

    Gene symbol
    GTPBP1
    Gene description
    GTP binding protein 1
    Locus tag
    CR201_G0024761
    See related
    Ensembl:ENSPPYG00000011827
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    NEW
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    Genomic context

    See GTPBP1 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 23 NC_085929.1 (45200377..45228723)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 22 NC_072007.1 (24298948..24327298)

    Chromosome 23 - NC_085929.1Genomic Context describing neighboring genes Neighboring gene translocase of outer mitochondrial membrane 22 Neighboring gene Josephin domain containing 1 Neighboring gene thioredoxin-dependent peroxide reductase, mitochondrial-like Neighboring gene Sad1 and UNC84 domain containing 2 Neighboring gene dynein axonemal light chain 4 Neighboring gene uncharacterized LOC134761209

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • DKFZp468M028

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in translational elongation IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132601.1NP_001126073.1  GTP-binding protein 1

      See identical proteins and their annotated locations for NP_001126073.1

      Status: PROVISIONAL

      Source sequence(s)
      CR859694
      UniProtKB/Swiss-Prot
      Q5R8Q7
      Conserved Domains (4) summary
      cd04165
      Location:77301
      GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
      COG5258
      Location:1489
      GTPBP1; GTPase [General function prediction only]
      cd03694
      Location:310396
      GTPBP_II; Domain II of the GTPBP family of GTP binding proteins
      cd03708
      Location:402488
      GTPBP_III; Domain III of the GP-1 family of GTPases

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_085929.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      45200377..45228723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024239609.3XP_024095377.3  GTP-binding protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A2J8UWM7, A0A2J8UWN4, H2P4E2
    2. XM_054542914.2XP_054398889.2  GTP-binding protein 1 isoform X2

      UniProtKB/Swiss-Prot
      Q5R8Q7
      UniProtKB/TrEMBL
      A0A2J8UWM9