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    NIPSNAP3A nipsnap homolog 3A [ Pongo abelii (Sumatran orangutan) ]

    Gene ID: 100172697, updated on 26-Mar-2024

    Summary

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    Gene symbol
    NIPSNAP3A
    Gene description
    nipsnap homolog 3A
    Locus tag
    CR201_G0008139
    See related
    Ensembl:ENSPPYG00000019468
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pongo abelii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
    Orthologs
    human all
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    Genomic context

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    See NIPSNAP3A in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 13 NC_071998.2 (95803044..95815363)
    RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 9 NC_071994.1 (80166887..80179209)

    Chromosome 13 - NC_071998.2Genomic Context describing neighboring genes Neighboring gene olfactory receptor 13D1 Neighboring gene olfactory receptor 13D1-like Neighboring gene uncharacterized LOC129047968 Neighboring gene nipsnap homolog 3B Neighboring gene ATP binding cassette subfamily A member 1 Neighboring gene uncharacterized LOC134759794

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • DKFZp468C1517

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein NipSnap homolog 3A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001132298.1 → NP_001125770.1  protein NipSnap homolog 3A

      See identical proteins and their annotated locations for NP_001125770.1

      Status: PROVISIONAL

      Source sequence(s)
      CR859109
      UniProtKB/Swiss-Prot
      Q5RAA9
      UniProtKB/TrEMBL
      A0A2J8WSA9, A0A8I5TYY7
      Related
      ENSPPYP00000021809.2, ENSPPYT00000022704.3
      Conserved Domains (1) summary
      pfam07978
      Location:37 → 136
      NIPSNAP; NIPSNAP

    RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Genomic

    1. NC_071998.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

      Range
      95803044..95815363
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5RAA9.1 GenPept UniProtKB/Swiss-Prot:Q5RAA9

    Gene LinkOut

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