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    BORCS7 BLOC-1 related complex subunit 7 [ Acyrthosiphon pisum (pea aphid) ]

    Gene ID: 100160487, updated on 10-May-2024

    Summary

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    Gene symbol
    BORCS7
    Gene description
    BLOC-1 related complex subunit 7
    See related
    APHIDBASE:ACYPI001781; EnsemblRapid:LOC100160487
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Acyrthosiphon pisum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Aphidoidea; Aphididae; Macrosiphini; Acyrthosiphon
    Orthologs
    fruit fly all
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    Genomic context

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    See BORCS7 in Genome Data Viewer
    Location:
    chromosome: A2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current pea_aphid_22Mar2018_4r6ur (GCF_005508785.1) A2 NC_042495.1 (92424702..92431157)
    102 previous assembly Acyr_2.0 (GCF_000142985.2) Unplaced Scaffold NW_003384754.1 (65095..66958)

    Chromosome A2 - NC_042495.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100162504 Neighboring gene blocked early in transport 1 Neighboring gene FK506-binding protein 39kD Neighboring gene uncharacterized LOC103310715 Neighboring gene replication factor C subunit RfC38

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of BORC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC100160487

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001162619.2 → NP_001156091.1  uncharacterized protein LOC100160487

      See identical proteins and their annotated locations for NP_001156091.1

      Status: PROVISIONAL

      Source sequence(s)
      AK341315
      UniProtKB/TrEMBL
      C4WV17
      Related
      NP_001156091.1, NM_001162619.2
      Conserved Domains (1) summary
      pfam16088
      Location:12 → 103
      BORCS7; BLOC-1-related complex sub-unit 7

    RefSeqs of Annotated Genomes: Acyrthosiphon pisum Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

    Genomic

    1. NC_042495.1 Reference pea_aphid_22Mar2018_4r6ur Primary Assembly

      Range
      92424702..92431157
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029488881.1 → XP_029344741.1  uncharacterized protein LOC100160487 isoform X1

      UniProtKB/TrEMBL
      C4WV17
      Related
      XP_029344741.1, XM_029488881.1
      Conserved Domains (1) summary
      pfam16088
      Location:12 → 103
      BORCS7; BLOC-1-related complex sub-unit 7

    2. XM_008189904.3 → XP_008188126.1  uncharacterized protein LOC100160487 isoform X1

      See identical proteins and their annotated locations for XP_008188126.1

      UniProtKB/TrEMBL
      C4WV17
      Related
      XP_008188126.1, XM_008189904.3
      Conserved Domains (1) summary
      pfam16088
      Location:12 → 103
      BORCS7; BLOC-1-related complex sub-unit 7
    Nucleotide Protein
    Heading Accession and Version

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