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    znf1065 zinc finger protein 1065 [ Danio rerio (zebrafish) ]

    Gene ID: 100126129, updated on 9-Dec-2024

    Summary

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    Official Symbol
    znf1065provided by ZNC
    Official Full Name
    zinc finger protein 1065provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-071004-94
    See related
    Ensembl:ENSDARG00000090366 AllianceGenome:ZFIN:ZDB-GENE-071004-94
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:171626
    Summary
    Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZNF572 (zinc finger protein 572) and ZNF774 (zinc finger protein 774). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See znf1065 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 4 NC_007115.7 (33422292..33428994)

    Chromosome 4 - NC_007115.7Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene uncharacterized LOC110439429 Neighboring gene uncharacterized LOC137490896 Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene transfer RNA glutamic acid (anticodon CUC)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007115.7 Chromosome 4 Reference GRCz11 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    General protein information

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    Preferred Names
    uncharacterized protein LOC100126129; zinc finger protein 568

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007115.7 Reference GRCz11 Primary Assembly

      Range
      33422292..33428994
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068219839.1 → XP_068075940.1  zinc finger protein 568

    2. XM_068219838.1 → XP_068075939.1  zinc finger protein 568

      Related
      ENSDARP00000125218.1, ENSDART00000150868.2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001109855.1: Suppressed sequence

      Description
      NM_001109855.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF808 (GeneID:388558).
    Nucleotide Protein
    Heading Accession and Version

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