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    Gm10340 predicted gene 10340 [ Mus musculus (house mouse) ]

    Gene ID: 100040697, updated on 4-Jan-2025

    Summary

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    Official Symbol
    Gm10340provided by MGI
    Official Full Name
    predicted gene 10340provided by MGI
    Primary source
    MGI:MGI:3641969
    See related
    AllianceGenome:MGI:3641969
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Is expressed in several structures, including cochlear duct; ganglia; rib; smooth muscle tissue; and submandibular gland primordium. [provided by Alliance of Genome Resources, Jan 2025]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Gm10340 in Genome Data Viewer
    Location:
    14 A2; 14 1.66 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (19329220..19339120, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (3130653..3140553)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA D830030K20 gene Neighboring gene predicted gene 17222 Neighboring gene predicted gene 5795 Neighboring gene STARR-seq mESC enhancer starr_35806 Neighboring gene predicted gene 2897 Neighboring gene esterase D/formylglutathione hydrolase, pseudogene Neighboring gene predicted gene 2888

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Takusan: a large gene family that regulates synaptic activity. Tu S, et al. Neuron, 2007 Jul 5. PMID 17610818, Free PMC Article
    2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    predicted gene 10340; uncharacterized protein Gm10340
    Names
    alpha15-takusan
    alpha17-takusan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      19329220..19339120 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011244803.2 → XP_011243105.1  uncharacterized protein Gm10340

      UniProtKB/TrEMBL
      A0AA74KT48
      Conserved Domains (1) summary
      pfam04822
      Location:61 → 141
      Takusan
    Nucleotide Protein Strain
    Heading Accession and Version

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