tbccd1 TBCC domain containing 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: tbccd1provided by ZNC
Official Full Name: TBCC domain containing 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-041210-222
See related: Ensembl:ENSDARG00000056886 AllianceGenome:ZFIN:ZDB-GENE-041210-222
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:162789; si:ch211-194d6.5
Summary: Predicted to be involved in maintenance of Golgi location and maintenance of centrosome location. Predicted to be located in centrosome; cytoplasm; and spindle pole. Predicted to be active in spindle pole centrosome. Orthologous to human TBCCD1 (TBCC domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 9

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (27740968..27749939, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (27930222..27939193, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Process	Evidence Code	Pubs
involved_in maintenance of Golgi location	IBA Inferred from Biological aspect of Ancestor more info
involved_in maintenance of centrosome location	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
located_in centrosome	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in spindle pole	IEA Inferred from Electronic Annotation more info
is_active_in spindle pole centrosome	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: TBCC domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001089540.2 → NP_001083009.2 TBCC domain-containing protein 1 isoform 1

Status: VALIDATED

Source sequence(s)

BX511265

UniProtKB/Swiss-Prot

A4QP31, A8WHY2, Q5SQE5

UniProtKB/TrEMBL

A0A8M1ND86, Z4YHS7

Related

ENSDARP00000064155.5, ENSDART00000064156.6

Conserved Domains (1) summary

pfam07986
Location:330 → 449

TBCC; Tubulin binding cofactor C