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    LOC100021433 zinc finger protein with KRAB and SCAN domains 8 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100021433, updated on 8-May-2024

    Summary

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    Gene symbol
    LOC100021433
    Gene description
    zinc finger protein with KRAB and SCAN domains 8
    See related
    EnsemblRapid:ENSMODG00000008027
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Also known as
    ZNF192; ZKSCAN8
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    Genomic context

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    See LOC100021433 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (250045954..250082544, complement)
    103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (261482685..261513165, complement)

    Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene elaC ribonuclease Z 2 Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene U6atac minor spliceosomal RNA Neighboring gene endogenous retrovirus group K member 6 Env polyprotein-like Neighboring gene survival of motor neuron-related-splicing factor 30-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein with KRAB and SCAN domains 8
    Names
    zinc finger protein 192
    zinc finger with KRAB and SCAN domains 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077228.1 Reference mMonDom1.pri

      Range
      250045954..250082544 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001373560.5 → XP_001373597.1  zinc finger protein with KRAB and SCAN domains 8

      UniProtKB/TrEMBL
      F6Y3I4
      Related
      ENSMODP00000031942.3, ENSMODT00000033516.4
      Conserved Domains (8) summary
      smart00431
      Location:48 → 158
      SCAN; leucine rich region
      cd07765
      Location:213 → 252
      KRAB_A-box; KRAB (Kruppel-associated box) domain -A box
      smart00349
      Location:213 → 256
      KRAB; krueppel associated box
      COG5048
      Location:315 → 474
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:430 → 450
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:316 → 338
      zf-C2H2; Zinc finger, C2H2 type
      pfam02023
      Location:48 → 133
      SCAN; SCAN domain
      pfam13465
      Location:499 → 522
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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