Protein Family Models for Protein (Select 896124049) - Protein Family Models

Select item 4250921.

NAD(P)-binding domain-containing protein

Date:: 2024-08-14

Family Accession:: NF025114.5
Method:: HMM

Select item 4240322.

NAD(P)-binding protein

Date:: 2024-08-14

Family Accession:: NF024842.5
Method:: HMM

Select item 4230263.

SidA/IucD/PvdA family monooxygenase

This is a family of Rossmann fold oxidoreductases that catalyse NADPH-dependent hydroxylation and are involved in siderophore biosynthesis. This family includes L-ornithine 5-monooxygenase, which catalyses the hydroxylation of L-ornithine at the N5 position [1,2], and L-lysine 6-monooxygenase, which catalyses the hydroxylation of lysine at the N6 position (EC:1.14.13.59) [3]. [1]. 8106324. Cloning and nucleotide sequence of the pvdA gene encoding the pyoverdin biosynthetic enzyme L-ornithine N5-oxygenase in Pseudomonas aeruginosa. Visca P, Ciervo A, Orsi N;. J Bacteriol. 1994;176:1128-1140. [2]. 16233371. dffA gene from Aspergillus oryzae encodes L-ornithine N5-oxygenase and is indispensable for deferriferrichrysin biosynthesis. Yamada O, Na Nan S, Akao T, Tominaga M, Watanabe H, Satoh T, Enei H, Akita O;. J Biosci Bioeng. 2003;95:82-88. [3]. 16461464. A genetic locus required for iron acquisition in Mycobacterium tuberculosis. Krithika R, Marathe U, Saxena P, Ansari MZ, Mohanty D, Gokhale RS;. Proc Natl Acad Sci U S A. 2006;103:2069-2074. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF024826.5
Method:: HMM

Select item 4169534.

FAD-dependent oxidoreductase

This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain. [1]. 8805537. Protein-protein interactions in the pyruvate dehydrogenase multienzyme complex: dihydrolipoamide dehydrogenase complexed with the binding domain of dihydrolipoamide acetyltransferase. Mande SS, Sarfaty S, Allen MD, Perham RN, Hol WG;. Structure 1996;4:277-286. (from Pfam)

GO Terms:

Molecular Function:: oxidoreductase activity (GO:0016491)

Date:: 2024-10-16

Family Accession:: NF019604.5
Method:: HMM

Select item 4117905.

Flavin-binding monooxygenase-like

This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases. [1]. 9538688. A hydrophobic sequence motif common to N-hydroxylating enzymes. Stehr M, Diekmann H, Smau L, Seth O, Ghisla S, Singh M, Macheroux P;. Trends Biochem Sci 1998;23:56-57. (from Pfam)

GO Terms:

Molecular Function:: N,N-dimethylaniline monooxygenase activity (GO:0004499)

Molecular Function:: flavin adenine dinucleotide binding (GO:0050660)

Molecular Function:: NADP binding (GO:0050661)

Date:: 2024-10-16

Family Accession:: NF012946.5
Method:: HMM

Select item 4024986.