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Links from Protein

Items: 13

1.

MmyB-like transcription regulator ligand binding domain

This domain is found in a family of actinobacterial transcription factors. The structure shows it has a PAS domain like fold and it is bound to Myristic acid [1]. [1]. 22844465. Structure of an MmyB-like regulator from C. aurantiacus, member of a new transcription factor family linked to antibiotic metabolism in actinomycetes. Xu Q, van Wezel GP, Chiu HJ, Jaroszewski L, Klock HE, Knuth MW, Miller MD, Lesley SA, Godzik A, Elsliger MA, Deacon AM, Wilson IA;. PLoS One. 2012;7:e41359. (from Pfam)

Date:
2024-10-16
Family Accession:
NF037627.5
Method:
HMM
2.

helix-turn-helix domain-containing protein

Members of this family contains a DNA-binding helix-turn-helix domain. This family contains many example antitoxins from bacterial toxin-antitoxin systems. These antitoxins are likely to be DNA-binding domains. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024252.5
Method:
HMM
3.

helix-turn-helix domain-containing protein

This domain is a helix-turn-helix domain that probably binds to DNA. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024949.5
Method:
HMM
4.

helix-turn-helix domain-containing protein

This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family [1]. [1]. 20196080. The crystal structure of NGO0477 from Neisseria gonorrhoeae reveals a novel protein fold incorporating a helix-turn-helix motif. Ren J, Sainsbury S, Nettleship JE, Saunders NJ, Owens RJ;. Proteins. 2010;78:1798-1802. (from Pfam)

Date:
2024-10-16
Family Accession:
NF013540.5
Method:
HMM
5.
new record, indexing in progress
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6.
new record, indexing in progress
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7.
new record, indexing in progress
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8.
new record, indexing in progress
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9.
new record, indexing in progress
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10.
new record, indexing in progress
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11.
new record, indexing in progress
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12.
new record, indexing in progress
Family Accession:
13.

helix-turn-helix transcriptional regulator

helix-turn-helix (HTH) transcriptional regulator containing a XRE (Xenobiotic Response Element) family HTH domain and a MmyB-like transcription regulator ligand binding domain, may control the expression of genes involved in stress response

Date:
2020-02-24
Family Accession:
14364791
Method:
Sparcle
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