Protein Family Models for Protein (Select 544825874) - Protein Family Models

Select item 4244401.

Sigma-54 interaction domain

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: transcription factor binding (GO:0008134)

Date:: 2024-08-14

Family Accession:: NF025885.5
Method:: HMM

Select item 4169352.

AAA family ATPase

This Pfam entry includes some of the AAA proteins not detected by the Pfam:PF00004 model. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the assembly, operation, and disassembly of protein complexes. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-10-16

Family Accession:: NF019348.5
Method:: HMM

Select item 4118793.

sigma 54-interacting transcriptional regulator

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: transcription factor binding (GO:0008134)

Date:: 2024-08-14

Family Accession:: NF012385.5
Method:: HMM

Select item 4109174.

response regulator

This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain. [1]. 7699720. Response regulators of bacterial signal transduction systems: selective domain shuffling during evolution. Pao GM, Saier MH;. J Mol Evol 1995;40:136-154. (from Pfam)

GO Terms:

Biological Process:: phosphorelay signal transduction system (GO:0000160)

Date:: 2024-10-16

Family Accession:: NF012301.5
Method:: HMM

Select item 4037125.