Protein Family Models for Protein (Select 504695163) - Protein Family Models

Select item 4282541.

This family represents the POTRA domain found in the membrane insertase TamA. [1]. 24056943. The structural basis of autotransporter translocation by TamA. Gruss F, Zahringer F, Jakob RP, Burmann BM, Hiller S, Maier T;. Nat Struct Mol Biol. 2013;20:1318-1320. [2]. 25101071. A comprehensive analysis of the Omp85/TpsB protein superfamily structural diversity, taxonomic occurrence, and evolution. Heinz E, Lithgow T;. Front Microbiol. 2014;5:370. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF036554.5
Method:: HMM

Select item 4171812.

POTRA domain-containing protein

This family is found primarily in bacterial surface antigens, normally as variable number repeats at the N-terminus. The C-terminus of these proteins is normally represented by Pfam:PF01103. The alignment centres on a -GY- or -GF- motif. Some members of this family are found in the mitochondria. It is predicted to have a mixed alpha/beta secondary structure. (from Pfam)

GO Terms:

Cellular Component:: outer membrane (GO:0019867)

Date:: 2024-08-14

Family Accession:: NF018899.5
Method:: HMM

Select item 4117353.

BamA/TamA family outer membrane protein

The Omp85 protein superfamily contains bacterial outer membrane proteins, which can function as protein translocases or as membrane protein assembly factors [1]. The family includes the membrane bound beta barrel of proteins such as BamA and TamA from E. coli. [1]. 25101071. A comprehensive analysis of the Omp85/TpsB protein superfamily structural diversity, taxonomic occurrence, and evolution. Heinz E, Lithgow T;. Front Microbiol. 2014;5:370. (from Pfam)

GO Terms:

Cellular Component:: outer membrane (GO:0019867)

Date:: 2024-10-16

Family Accession:: NF013283.5
Method:: HMM

Select item 4027194.