Protein Family Models for Protein (Select 496063189) - Protein Family Models

Select item 4219471.

Probable RNA and SrmB- binding site of polymerase A

This region encompasses much of the RNA and SrmB binding motifs on polymerase A. [1]. 10361280. Poly(A) polymerase I of Escherichia coli: characterization of. the catalytic domain, an RNA binding site and regions for the. interaction with proteins involved in mRNA degradation.. Raynal LC, Carpousis AJ;. Mol Microbiol. 1999;32:765-775. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024041.5
Method:: HMM

Select item 4135802.

HD domain-containing protein

HD domains are metal dependent phosphohydrolases. [1]. 9868367. The HD domain defines a new superfamily of metal-dependent. phosphohydrolases.. Aravind L, Koonin EV;. Trends Biochem Sci 1998;23:469-472. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF014069.5
Method:: HMM

Select item 4134003.

Poly A polymerase head domain

This family includes nucleic acid independent RNA polymerases, such as Poly(A) polymerase, which adds the poly (A) tail to mRNA EC:2.7.7.19. This family also includes the tRNA nucleotidyltransferase that adds the CCA to the 3' of the tRNA EC:2.7.7.25. This family is part of the nucleotidyltransferase superfamily. [1]. 1438224. Identification of the gene for an Escherichia coli poly(A). polymerase.. Cao GJ, Sarkar N;. Proc Natl Acad Sci U S A 1992;89:10380-10384. (from Pfam)

GO Terms:

Molecular Function:: RNA binding (GO:0003723)

Biological Process:: RNA processing (GO:0006396)

Molecular Function:: nucleotidyltransferase activity (GO:0016779)

Date:: 2024-08-14

Family Accession:: NF013871.5
Method:: HMM

Select item 3993174.