Protein Family Models for Protein (Select 496042435) - Protein Family Models

Select item 4253871.

This family consists of uncharacterized proteins around 340 residues in length and is mainly found in various Bacteroides and Prevotella species. The function of this protein is unknown. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF027663.5
Method:: HMM

Select item 4240962.

BT_3044 domain-containing protein

This entry represents a domain found at the C-terminal end of a group of proteins from bacteroidetes, including BT_3044 from Bacteroides thetaiotaomicron, a glycan binding enzyme that could degrade oligosaccharides or even large molecular size glycans [1]. [1]. 34420703. Discrete genetic loci in human gut Bacteroides thetaiotaomicron confer pectin metabolism. Li M, Li S, Guo X, Guo C, Wang Y, Du Z, Zhang Z, Xie C, Ding K;. Carbohydr Polym. 2021;272:118534. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF025632.5
Method:: HMM

Select item 4198323.

BT_3987 domain-containing protein

This domain, previously known as DUF1735, is found in a number of proteins mainly found in firmicutes, including BT_3987 from Bacteroides thetaiotaomicron, which displays hydrolytic activity against Hy-type N-glycans, probably initiating the degradation of this type of glycan in the human gut [1]. This domain adopts a beta-sandwich fold. [1]. 34324829. GH18 endo-beta-N-acetylglucosaminidases use distinct mechanisms to process hybrid-type N-linked glycans. Trastoy B, Du JJ, Li C, Garcia-Alija M, Klontz EH, Roberts BR, Donahue TC, Wang LX, Sundberg EJ, Guerin ME;. J Biol Chem. 2021;297:101011. [2]. 34420703. Discrete genetic loci in human gut Bacteroides thetaiotaomicron confer pectin metabolism. Li M, Li S, Guo X, Guo C, Wang Y, Du Z, Zhang Z, Xie C, Ding K;. Carbohydr Polym. 2021;272:118534. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF020111.5
Method:: HMM

Select item 4032084.