Protein Family Models for Protein (Select 489434639) - Protein Family Models

Select item 4353581.

DNA replication/repair protein RecF

RecF forms a complex with RecO and RecR to form a complex with roles in both DNA repair and DNA replication.

Gene:: recF

GO Terms:

Molecular Function:: single-stranded DNA binding (GO:0003697)

Molecular Function:: ATP binding (GO:0005524)

Biological Process:: DNA replication (GO:0006260)

Biological Process:: DNA repair (GO:0006281)

Biological Process:: DNA recombination (GO:0006310)

Biological Process:: SOS response (GO:0009432)

Date:: 2024-09-04

Family Accession:: TIGR00611.2
Method:: HMM

Select item 4272042.

AAA family ATPase

GO Terms:

Biological Process:: double-strand break repair (GO:0006302)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-08-14

Family Accession:: NF024867.5
Method:: HMM

Select item 4220313.

AAA family ATPase

Several members are annotated as being of the abortive phage resistance system, in which case the family would be acting as the toxin for a type IV toxin-antitoxin resistance system. (from Pfam)

GO Terms:

Molecular Function:: ATP binding (GO:0005524)

Molecular Function:: ATP hydrolysis activity (GO:0016887)

Date:: 2024-08-14

Family Accession:: NF024700.5
Method:: HMM

Select item 4139864.

RecF/RecN/SMC N terminal domain

This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics [1]. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. [1]. 10429180. Structural maintenance of chromosomes (SMC) proteins: conserved molecular properties for multiple biological functions. Strunnikov AV, Jessberger R;. Eur J Biochem 1999;263:6-13. [2]. 9640531. SMC protein complexes and higher-order chromosome dynamics. Hirano T;. Curr Opin Cell Biol 1998;10:317-322. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF014516.5
Method:: HMM

Select item 4010755.

new record, indexing in progress

Family Accession:

Select item 4001066.

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Family Accession:

Select item 3928297.

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Family Accession:

Select item 3655288.

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Family Accession:

Select item 3581069.

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Family Accession:

Select item 34793310.

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Family Accession:

Select item 5982211.

DNA replication/repair protein RecF

DNA replication/repair protein RecF is required for DNA replication and normal SOS inducibility; it binds preferentially to single-stranded, linear DNA

Date:: 2023-02-06

Family Accession:: 11477886
Method:: Sparcle

Select item 2186212.

new record, indexing in progress

Family Accession:

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