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Links from Protein

Items: 8

1.

2'-5' RNA ligase family protein

This family contains proteins related to Pfam:PF02834. These proteins are likely to be enzymes, but they may not share the RNA ligase activity. (from Pfam)

Date:
2024-08-14
Family Accession:
NF024952.5
Method:
HMM
2.

2'-5' RNA ligase family protein

Members of this family are bacterial and archaeal RNA ligases that are able to ligate tRNA half molecules containing 2',3'-cyclic phosphate and 5' hydroxyl termini to products containing the 2',5' phosphodiester linkage. Each member of this family contains an internal duplication, each of which contains an HXTX motif that defines the family. The structure of a related protein is known [1]. They belong to the 2H phosphoesterase superfamily [2]. They share a common active site, characterised by two conserved histidines, with vertebrate myelin-associated 2',3' phosphodiesterases, plant Arabidopsis thaliana CPDases and several several bacteria and virus proteins. [1]. 11080166. Structure and mechanism of activity of the cyclic. phosphodiesterase of Appr>p, a product of the tRNA splicing. reaction.. Hofmann A, Zdanov A, Genschik P, Ruvinov S, Filipowicz W,. Wlodawer A;. EMBO J 2000;19:6207-6217.. [2]. 12466548. Detection of novel members, structure-function analysis and. evolutionary classification of the 2H phosphoesterase. superfamily.. Mazumder R, Iyer LM, Vasudevan S, Aravind L;. Nucleic Acids Res 2002;30:5229-5243. (from Pfam)

Date:
2024-08-14
Family Accession:
NF014849.5
Method:
HMM
3.
new record, indexing in progress
Family Accession:
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.

YjcG family protein

YjcG family protein similar to Bacillus subtilis phosphoesterase YjcG, a putative 2'-5' RNA Ligase

Date:
2020-10-09
Family Accession:
11486790
Method:
Sparcle
8.

hypothetical protein

Date:
2020-10-26
Family Accession:
NF010223.0
Method:
HMM
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