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Links from Protein

Items: 12

1.

cysteine peptidase family C39 domain-containing protein

This domain often occurs confers as the leader peptidase domain of transporter subunits involved in cleaving peptides or proteins, such as bacteriocins with a double-glycine type leader peptide, during export.

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Biological Process:
proteolysis (GO:0006508)
Molecular Function:
peptidase activity (GO:0008233)
Cellular Component:
membrane (GO:0016020)
Date:
2024-10-16
Family Accession:
NF015377.5
Method:
HMM
2.

ABC transporter transmembrane domain-containing protein

This family represents a unit of six transmembrane helices. Many members of the ABC transporter family (Pfam:PF00005) have two such regions. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Cellular Component:
membrane (GO:0016020)
Molecular Function:
ATPase-coupled transmembrane transporter activity (GO:0042626)
Biological Process:
transmembrane transport (GO:0055085)
Molecular Function:
ABC-type transporter activity (GO:0140359)
Date:
2024-08-14
Family Accession:
NF012869.5
Method:
HMM
3.

ATP-binding cassette domain-containing protein

ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains. [1]. 1864505. Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. Rosteck PR Jr, Reynolds PA, Hershberger CL;. Gene 1991;102:27-32. [2]. 1977073. Structure and function of haemolysin B,P-glycoprotein and other members of a novel family of membrane translocators. Blight MA, Holland IB;. Mol Microbiol 1990;4:873-880. [3]. 2229036. Binding protein-dependent transport systems. Higgins CF, Hyde SC, Mimmack MM, Gileadi U, Gill DR, Gallagher MP;. J Bioenerg Biomembr 1990;22:571-592. [4]. 9872322. Crystal structure of the ATP-binding subunit of an ABC transporter. Hung LW, Wang IX, Nikaido K, Liu PQ, Ames GF, Kim SH;. Nature 1998;396:703-707. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Date:
2024-10-16
Family Accession:
NF012235.5
Method:
HMM
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.
new record, indexing in progress
Family Accession:
11.

enterohemolysin T1SS ABC transporter permease/ATPase EhxB

Gene:
ehxB
Date:
2019-08-29
Family Accession:
NBR008675
Method:
BlastRule
12.

type I secretion system permease/ATPase

Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Cellular Component:
membrane (GO:0016020)
Biological Process:
protein secretion by the type I secretion system (GO:0030253)
Cellular Component:
type I protein secretion system complex (GO:0030256)
Date:
2024-05-30
Family Accession:
TIGR01846.1
Method:
HMM
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