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Links from Protein

Items: 15

1.

RuvB AAA lid domain

The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein [1]. This entry contains the AAA lid domain that is found to the C-terminus of the AAA domain. [1]. 12423347. The RuvABC resolvasome.. Dickman MJ, Ingleston SM, Sedelnikova SE, Rafferty JB, Lloyd RG,. Grasby JA, Hornby DP;. Eur J Biochem 2002;269:5492-5501. (from Pfam)

Date:
2024-08-14
Family Accession:
NF037140.5
Method:
HMM
2.

Holliday junction DNA helicase RuvB C-terminal domain-containing protein

The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein [1]. This family consists of the C-terminal region of the RuvB protein which is thought to be helicase DNA-binding domain. [1]. 12423347. The RuvABC resolvasome.. Dickman MJ, Ingleston SM, Sedelnikova SE, Rafferty JB, Lloyd RG,. Grasby JA, Hornby DP;. Eur J Biochem 2002;269:5492-5501. (from Pfam)

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Biological Process:
DNA repair (GO:0006281)
Biological Process:
DNA recombination (GO:0006310)
Molecular Function:
four-way junction helicase activity (GO:0009378)
Date:
2024-08-14
Family Accession:
NF017317.5
Method:
HMM
3.

Holliday junction DNA helicase RuvB P-loop domain

The RuvB protein makes up part of the RuvABC revolvasome which catalyses the resolution of Holliday junctions that arise during genetic recombination and DNA repair. Branch migration is catalysed by the RuvB protein that is targeted to the Holliday junction by the structure specific RuvA protein [1]. This family contains the N-terminal region of the protein. [1]. 12423347. The RuvABC resolvasome.. Dickman MJ, Ingleston SM, Sedelnikova SE, Rafferty JB, Lloyd RG,. Grasby JA, Hornby DP;. Eur J Biochem 2002;269:5492-5501. (from Pfam)

GO Terms:
Biological Process:
DNA repair (GO:0006281)
Biological Process:
DNA recombination (GO:0006310)
Molecular Function:
four-way junction helicase activity (GO:0009378)
Date:
2024-08-14
Family Accession:
NF017321.5
Method:
HMM
4.

AAA family ATPase

AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. [1]. 7646486. A 200-amino acid ATPase module in search of a basic function.. Confalonieri F, Duguet M;. Bioessays 1995;17:639-650.. A large extension of the family. [2]. 9927482. AAA+: A class of chaperone-like ATPases associated with the. assembly, operation, and disassembly of protein complexes.. Neuwald AF, Aravind L, Spouge JL, Koonin EV;. Genome Res 1999;9:27-43. (from Pfam)

GO Terms:
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
ATP hydrolysis activity (GO:0016887)
Date:
2024-08-14
Family Accession:
NF012234.5
Method:
HMM
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.
new record, indexing in progress
Family Accession:
11.
new record, indexing in progress
Family Accession:
12.
new record, indexing in progress
Family Accession:
13.

Holliday junction branch migration DNA helicase RuvB

Holliday junction branch migration DNA helicase RuvB is an ATPase that forms a complex with RuvA; the helicase RuvAB mediates the Holliday junction migration by localized denaturation and reannealing

Date:
2024-08-06
Family Accession:
11455025
Method:
Sparcle
14.

Holliday junction branch migration DNA helicase RuvB

All proteins in this family for which functions are known are 5'-3' DNA helicases that, as part of a complex with RuvA homologs serve as a 5'-3' Holliday junction helicase. RuvA specifically binds Holliday junctions as a sandwich of two tetramers and maintains the configuration of the junction. It forms a complex with two hexameric rings of RuvB, the subunit that contains helicase activity. The complex drives ATP-dependent branch migration of the Holliday junction recombination intermediate. The endonuclease RuvC resolves junctions.

Gene:
ruvB
GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Molecular Function:
ATP binding (GO:0005524)
Biological Process:
DNA repair (GO:0006281)
Biological Process:
DNA recombination (GO:0006310)
Molecular Function:
four-way junction helicase activity (GO:0009378)
Date:
2024-05-16
Family Accession:
TIGR00635.1
Method:
HMM
15.

Holliday junction branch migration DNA helicase RuvB

Promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration

Gene:
ruvB
GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Molecular Function:
ATP binding (GO:0005524)
Biological Process:
DNA repair (GO:0006281)
Biological Process:
DNA recombination (GO:0006310)
Molecular Function:
four-way junction helicase activity (GO:0009378)
Date:
2021-07-22
Family Accession:
NF000868.0
Method:
HMM
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