Protein Family Models for Protein (Select 446292267) - Protein Family Models

Select item 4318261.

HHH domain

Date:: 2024-08-14

Family Accession:: NF036972.5
Method:: HMM

Select item 4295622.

Tex central region-like

Date:: 2024-08-14

Family Accession:: NF046356.1
Method:: HMM

Select item 4254243.

Tex protein YqgF-like domain

This is the YqgF-like domain of the bacterial Tex protein, which is involved in transcriptional processes [1]. [1]. 18321528. Crystal structure and RNA binding of the Tex protein from. Pseudomonas aeruginosa.. Johnson SJ, Close D, Robinson H, Vallet-Gely I, Dove SL, Hill. CP;. J Mol Biol. 2008;377:1460-1473. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF028231.5
Method:: HMM

Select item 4245474.

Helix-hairpin-helix motif

Date:: 2024-08-14

Family Accession:: NF025986.5
Method:: HMM

Select item 4217455.

helix-hairpin-helix domain-containing protein

The HhH domain is a short DNA-binding domain [2]. [1]. 8692686. The helix-hairpin-helix DNA-binding motif: a structural basis. for non-sequence-specific recognition of DNA.. Doherty AJ, Serpell LC, Ponting CP;. Nucleic Acids Res 1996;24:2488-2497.. [2]. 18439896. Structural biochemistry of a bacterial checkpoint protein. reveals diadenylate cyclase activity regulated by DNA. recombination intermediates.. Witte G, Hartung S, Buttner K, Hopfner KP;. Mol Cell. 2008;30:167-178. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024245.5
Method:: HMM

Select item 4194826.

Tex-like N-terminal domain-containing protein

This presumed domain is found at the N-terminus of Swiss:Q45388. This protein defines a novel family of prokaryotic transcriptional accessory factors [1]. [1]. 8755871. A new gene locus of Bordetella pertussis defines a novel family. of prokaryotic transcriptional accessory proteins.. Fuchs TM, Deppisch H, Scarlato V, Gross R;. J Bacteriol. 1996;178:4445-4452. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF020928.5
Method:: HMM

Select item 4108417.

S1 RNA-binding domain-containing protein

The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. Structure and an extension of S1 family.. [1]. 9008164. The solution structure of the S1 RNA binding domain: a member of. an ancient nucleic acid-binding fold.. Bycroft M, Hubbard TJ, Proctor M, Freund SM, Murzin AG;. Cell 1997;88:235-242. (from Pfam)

GO Terms:

Molecular Function:: nucleic acid binding (GO:0003676)

Date:: 2024-08-14

Family Accession:: NF012784.5
Method:: HMM

Select item 4038768.