Protein Family Models for Protein (Select 1473454026) - Protein Family Models

Select item 4255861.

carboxypeptidase regulatory-like domain-containing protein

Date:: 2024-08-14

Family Accession:: NF025006.5
Method:: HMM

Select item 4238442.

This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF026255.5
Method:: HMM

Select item 4225293.

carboxypeptidase-like regulatory domain-containing protein

This domain family is found in bacteria, archaea and eukaryotes, and is approximately 90 amino acids in length. The family is found in association with Pfam:PF07715 and Pfam:PF00593. [1]. 10986238. Characterization of four outer membrane proteins involved in binding starch to the cell surface of Bacteroides thetaiotaomicron. Shipman JA, Berleman JE, Salyers AA;. J Bacteriol. 2000;182:5365-5372. [2]. 11717282. Biochemical analysis of interactions between outer membrane proteins that contribute to starch utilization by Bacteroides thetaiotaomicron. Cho KH, Salyers AA;. J Bacteriol 2001;183:7224-7230. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF025092.5
Method:: HMM

Select item 4111594.

TonB-dependent receptor domain-containing protein

This entry represents the beta-barrel domain of TonB-dependent receptors, such as BtuB, CirA, FatA, FcuT, FecA, FepA, among others [1]. [1]. 9886293. Crystal structure of the outer membrane active transporter FepA from Escherichia coli. Buchanan SK, Smith BS, Venkatramani L, Xia D, Esser L, Palnitkar M, Chakraborty R, van der Helm D, Deisenhofer J;. Nat Struct Biol 1999;6:56-63. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF012801.5
Method:: HMM

Select item 4016075.