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Links from Protein

Items: 8

1.

NedA-like, galactose-binding domain

This galactose-binding domain is found in Sialidase from Micromonospora viridifaciens (NedA), which releases sialic acids for use as carbon and energy sources. This domain shows a jelly-roll topology [3]. Paper describing PDB structure 1czs. [1]. 10586886. Crystal structures of the membrane-binding C2 domain of human coagulation factor V. Macedo-Ribeiro S, Bode W, Huber R, Quinn-Allen MA, Kim SW, Ortel TL, Bourenkov GP, Bartunik HD, Stubbs MT, Kane WH, Fuentes-Prior P;. Nature. 1999;402:434-439. Paper describing PDB structure 1d7p. [2]. 10586887. Structure of the C2 domain of human factor VIII at 1.5 A resolution. Pratt KP, Shen BW, Takeshima K, Davie EW, Fujikawa K, Stoddard BL;. Nature. 1999;402:439-442. Paper describing PDB structure 1eut. [3]. 8591030. The three domains of a bacterial sialidase: a beta-propeller, an immunoglobulin module and a galactose-binding jelly-roll. Gaskell A, Crennell S, Taylor G;. Structure. 1995;3:1197-1205. Paper describing PDB structure 1gof. [4]. 2002850. Novel thioether bond revealed by a 1.7 A crystal structure of galactose oxidase. Ito N, Phillips SE, Stevens C, Ogel ZB, McPherson MJ, Keen JN, Yadav KD, Knowles PF;. Nature 1991;350:87-90. Paper describing PDB structure 1iqd. [5]. 11418455. Structure of a factor VIII C2 domain-immunoglobulin G4kappa Fab complex: identification of an inhibitory antibody epitope on the surface of factor VIII. Spiegel PC Jr, Jacquemin M, Saint-Remy JM, Stoddard BL, Pratt KP;. Blood. 2001;98:13-19. (from Pfam)

Date:
2024-10-16
Family Accession:
NF046334.1
Method:
HMM
2.

discoidin domain-containing protein

This domain is also known as the discoidin (DS) domain family [1]. Extension of family to prokaryotes. [1]. 9684896. The discoidin domain family revisited: new members from prokaryotes and a homology-based fold prediction. Baumgartner S, Hofmann K, Chiquet-Ehrismann R, Bucher P;. Protein Sci 1998;7:1626-1631. (from Pfam)

Date:
2024-10-16
Family Accession:
NF012956.5
Method:
HMM
3.

alpha-L-fucosidase

GO Terms:
Molecular Function:
alpha-L-fucosidase activity (GO:0004560)
Biological Process:
carbohydrate metabolic process (GO:0005975)
Date:
2024-08-14
Family Accession:
NF013300.5
Method:
HMM
4.
new record, indexing in progress
Family Accession:
5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.

alpha-L-fucosidase

alpha-L-fucosidase is a glycoside hydrolase 29 family protein that catalyzes the hydrolysis of an alpha-L-fucoside to form L-fucose and an alcohol; contains a coagulation factor 5/8 C-terminal domain

Date:
2020-11-13
Family Accession:
11466909
Method:
Sparcle
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