Protein Family Models for Protein (Select 1468633876) - Protein Family Models

Select item 4206771.

helix-turn-helix domain-containing protein

GO Terms:

Molecular Function:: DNA-binding transcription factor activity (GO:0003700)

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Molecular Function:: sequence-specific DNA binding (GO:0043565)

Date:: 2024-08-14

Family Accession:: NF024242.5
Method:: HMM

Select item 4180852.

cupin domain-containing protein

This family represents the conserved barrel domain of the 'cupin' superfamily [1] ('cupa' is the Latin term for a small barrel). [1]. 9573603. Cupins: a new superfamily of functionally diverse proteins that include germins and plant storage proteins. Dunwell JM;. Biotechnol Genet Eng Rev 1998;15:1-32. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF019498.5
Method:: HMM

Select item 4137313.

AraC family ligand binding domain-containing protein

This family represents the arabinose-binding and dimerisation domain of the bacterial gene regulatory protein AraC. The domain is found in conjunction with the helix-turn-helix (HTH) DNA-binding motif Pfam:PF00165. This domain is distantly related to the Cupin domain Pfam:PF00190. [1]. 9103202. Structural basis for ligand-regulated oligomerization of AraC. Soisson SM, MacDougall-Shackleton B, Schleif R, Wolberger C;. Science 1997;276:421-425. (from Pfam)

GO Terms:

Biological Process:: regulation of DNA-templated transcription (GO:0006355)

Date:: 2024-10-16

Family Accession:: NF014376.5
Method:: HMM

Select item 4012564.