Protein Family Models for Protein (Select 1463775112) - Protein Family Models

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Select item 4283571.

This family represents a novel bifunctional feruloyl and acetyl xylan esterase (BD-FAE, previously known as bifunctional carbohydrate esterase (CE)), which is active on complex natural xylans and was identified as the basis of a monophyletic clade gathering all homologs identified in PULs (polysaccharide utilisation loci) predicted to act on xylan. It adopts an alpha-beta-hydrolase fold with the catalytic triad Ser-Asp-His [1]. This new family of proteins is a new candidate for biomass processing due to its capacity to remove ferulic acid and acetic acid from natural corn and birchwood xylan substrates [1]. [1]. 34059129. Polysaccharide utilization loci-driven enzyme discovery reveals BD-FAE: a bifunctional feruloyl and acetyl xylan esterase active on complex natural xylans. Hameleers L, Penttinen L, Ikonen M, Jaillot L, Faure R, Terrapon N, Deuss PJ, Hakulinen N, Master ER, Jurak E;. Biotechnol Biofuels. 2021;14:127. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF042769.3
Method:: HMM

Select item 4216682.

serine aminopeptidase domain-containing protein

This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with Pfam:PF00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF023568.5
Method:: HMM

Select item 4209693.

alpha/beta fold hydrolase

This family contains alpha/beta hydrolase enzymes of diverse specificity. (from Pfam)

Date:: 2024-08-14

Family Accession:: NF024109.5
Method:: HMM

Select item 4128864.

5'-nucleotidase C-terminal domain-containing protein

GO Terms:

Biological Process:: nucleotide catabolic process (GO:0009166)

Molecular Function:: hydrolase activity (GO:0016787)

Date:: 2024-08-14

Family Accession:: NF014871.5
Method:: HMM

Select item 4121775.

dienelactone hydrolase family protein

GO Terms:

Molecular Function:: hydrolase activity (GO:0016787)

Date:: 2024-08-14

Family Accession:: NF013866.5
Method:: HMM

Select item 4118786.

metallophosphoesterase

This family includes a diverse range of phosphoesterases [1], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases as well as nucleases such as bacterial SbcD Swiss:P13457 or yeast MRE11 Swiss:P32829. The most conserved regions in this superfamily centre around the metal chelating residues. [1]. 9685491. Phosphoesterase domains associated with DNA polymerases of diverse origins. Aravind L, Koonin EV;. Nucleic Acids Res 1998;26:3746-3752. (from Pfam)

GO Terms:

Molecular Function:: hydrolase activity (GO:0016787)

Date:: 2024-10-16

Family Accession:: NF012376.5
Method:: HMM

Select item 4116397.

prolyl oligopeptidase family serine peptidase

GO Terms:

Biological Process:: proteolysis (GO:0006508)

Molecular Function:: serine-type peptidase activity (GO:0008236)

Date:: 2024-08-14

Family Accession:: NF012546.5
Method:: HMM

Select item 4114358.

S-layer homology domain-containing protein

Date:: 2024-08-14

Family Accession:: NF012613.5
Method:: HMM

Select item 4113299.

alpha/beta fold hydrolase

This catalytic domain is found in a very wide range of enzymes. [1]. 1409539. The alpha/beta hydrolase fold. Ollis DL, Cheah E, Cygler M, Dijkstra B, Frolow F, Franken SM, Harel M, Remington SJ, Silman I, Schrag J, Sussman JL, Verschueren KHG, Goldman A;. Protein Eng 1992;5:197-211. (from Pfam)

Date:: 2024-10-16

Family Accession:: NF012770.5
Method:: HMM

Select item 40822610.