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probable ribonuclease ZC3H12B isoform X2 [Danio rerio]

NCBI Reference Sequence: XP_005165266.1

Identical Proteins FASTA Graphics 

LOCUS       XP_005165266            1012 aa            linear   VRT 08-SEP-2024
DEFINITION  probable ribonuclease ZC3H12B isoform X2 [Danio rerio].
ACCESSION   XP_005165266
VERSION     XP_005165266.1
DBLINK      BioProject: PRJNA13922
DBSOURCE    REFSEQ: accession XM_005165209.5
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018394572.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1012
                     /organism="Danio rerio"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="5"
                     /map="unlocalized"
     Protein         1..1012
                     /product="probable ribonuclease ZC3H12B isoform X2"
                     /calculated_mol_wt=110668
     Region          16..70
                     /region_name="KH-I_N4BP1_like_rpt1"
                     /note="first type I K homology (KH) RNA-binding domain
                     found in the family of NEDD4-binding protein 1 (N4BP1);
                     cd09032"
                     /db_xref="CDD:411808"
     Region          265..306
                     /region_name="UBA_6"
                     /note="UBA-like domain; pfam18039"
                     /db_xref="CDD:407876"
     Region          353..483
                     /region_name="PIN_Zc3h12-like"
                     /note="PRORP-like PIN domain of ribonuclease Zc3h12a and
                     related proteins; cd18729"
                     /db_xref="CDD:350296"
     Region          520..538
                     /region_name="zf-CCCH_2"
                     /note="RNA-binding, Nab2-type zinc finger; pfam14608"
                     /db_xref="CDD:464217"
     Region          972..1007
                     /region_name="Regnase_1_C"
                     /note="Endoribonuclease Regnase 1/ ZC3H12 C-terminal
                     domain; pfam18561"
                     /db_xref="CDD:465803"
     CDS             1..1012
                     /gene="zc3h12b"
                     /coded_by="XM_005165209.5:176..3214"
                     /db_xref="GeneID:100002370"
                     /db_xref="ZFIN:ZDB-GENE-060526-290"
ORIGIN      
        1 mvlelaapag agpalqrcip hiqrvfrvrv scsaaesscd spnagssiiv niedgkeedc
       61 tkakeyivsl ispvhkhrer ltlwlqrrlh alraaieyes cavvqvrdha lelqgghaqv
      121 taacamlqrl kmehrgcrdp qpspaaaghe speeeeeeed eeageegsss esegevrprs
      181 gssggvssag sgdcpvgrrr dlliaakphr qlcrsscldr psfsqsstlq elraddtctd
      241 psqkalapps saspmslrqt sdrdyqtkmd falklgysge qvesvlsklg analindvla
      301 elvrlgnkgd pesqtaagsa sfaprtvgak eavspeasle edssdtydnl rpividgsnv
      361 amshgnkevf sclgiqlavd wflekghkdi tvfvpawrke qsrpdapikd qeilrkleke
      421 kilvftpsrr vqgrrvvcyd drfivklacd sdgiivsndn yrdlqnekpe wkkfieerll
      481 mysfvndkfm ppddplgrhg pslenflrkr pvvpehkkqp cpygkkctyg hkckyyhper
      541 anqpqravad elrafaklsa vktmsegala kcgtsgaank gesgseakrv apkrqsdpsi
      601 rsvaceqeer lcpmrkaeas svpslvsals vptmpltksh aagalntrsa sspvpgslhf
      661 thsslehags vqyppilvtn sqgasvayge pfpkydsvvs dhgyysmlsd fstislqdsf
      721 csleqpepvg vgggysgrap smcpepgrsh ssdsfssysg elylnslegs lddsmksapt
      781 qpsaqtrlqa fahgfhheal trvqsygtde pkpgprkqts ahlaphtqhp vvgarsscpg
      841 dypplpqnvl psvspsqpgr slgmtrmdsi sdsrlyesnp lrqrrpplcr eqhaswdplp
      901 cgnepysygg ygltgalmpc cervmvrsmp ekmeqiwrsp wdsvpppppa trgpagdhqe
      961 rhpipehqyq tyrnlcnifp ayvvhsvmek nphmtdpqql aavivtelrs ch
//
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