LOCUS NP_001078708 644 aa linear PLN 20-OCT-2022
DEFINITION Protein kinase superfamily protein [Arabidopsis thaliana].
ACCESSION NP_001078708
VERSION NP_001078708.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_001085239.2
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 644)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (residues 1 to 644)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 644)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 644)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AED95090.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..644
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
Protein 1..644
/product="Protein kinase superfamily protein"
/calculated_mol_wt=72817
Region 137..421
/region_name="STKc_CDK9_like"
/note="Catalytic domain of Cyclin-Dependent protein Kinase
9-like Serine/Threonine Kinases; cd07840"
/db_xref="CDD:270832"
Site order(143..146,151,164,166,183,197,215..218,221,223..224,
261,263,265..266,268,279,282,295,297..300,302,340..341)
/site_type="active"
/db_xref="CDD:270832"
Site order(143..146,151,164,166,197,215..218,221,224,265..266,
268,279)
/site_type="other"
/note="ATP binding site [chemical binding]"
/db_xref="CDD:270832"
Site order(175..177,179,182,186,189,199..202,204,211)
/site_type="other"
/note="CDK/cyclin interface [polypeptide binding]"
/db_xref="CDD:270832"
Site order(183,223,261,263,282,295,297..300,302,340..341)
/site_type="other"
/note="polypeptide substrate binding site [polypeptide
binding]"
/db_xref="CDD:270832"
Site order(278..289,294..302)
/site_type="other"
/note="activation loop (A-loop)"
/db_xref="CDD:270832"
CDS 1..644
/locus_tag="AT5G44290"
/gene_synonym="K9L2.5; K9L2_5"
/coded_by="NM_001085239.2:279..2213"
/inference="Similar to RNA sequence,
EST:INSD:EH977750.1,INSD:AV805134.1,INSD:EL083240.1,
INSD:EH982466.1,INSD:CD531298.1,INSD:EH960043.1,
INSD:EL326022.1,INSD:AV800599.1,INSD:AV796377.1,
INSD:BP783559.1,INSD:EH825814.1,INSD:BP606760.1,
INSD:CD530181.1,INSD:CB256240.1,INSD:EG497821.1,
INSD:ES209174.1,INSD:AV809502.1,INSD:BP631621.1,
INSD:EL264492.1,INSD:ES019070.1,INSD:EH860008.1,
INSD:EG478393.1,INSD:BP788121.1,INSD:BP778742.1,
INSD:BP611907.1,INSD:EL051604.1,INSD:EH936535.1,
INSD:EG453310.1,INSD:AV790805.1,INSD:EL045798.1,
INSD:EL068779.1,INSD:EL212789.1,INSD:EL187784.1,
INSD:EL012712.1,INSD:AV805533.1,INSD:EH796843.1,
INSD:DR234029.1,INSD:DR362379.1,INSD:EH796008.1,
INSD:AV547216.1,INSD:EL054929.1,INSD:AI998987.1,
INSD:EL209682.1,INSD:EG454232.1,INSD:AV810365.1,
INSD:EL252762.1,INSD:ES024514.1"
/inference="similar to RNA sequence,
mRNA:INSD:BT002282.1,INSD:BX833301.1"
/note="Protein kinase superfamily protein; FUNCTIONS IN:
protein serine/threonine kinase activity, protein kinase
activity, kinase activity, ATP binding; INVOLVED IN:
protein amino acid phosphorylation; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Protein kinase, ATP binding site (InterPro:IPR017441),
Protein kinase, catalytic domain (InterPro:IPR000719),
Serine/threonine-protein kinase domain
(InterPro:IPR002290), Serine/threonine-protein kinase-like
domain (InterPro:IPR017442), Protein kinase-like domain
(InterPro:IPR011009), Serine/threonine-protein kinase,
active site (InterPro:IPR008271); BEST Arabidopsis
thaliana protein match is: Protein kinase superfamily
protein (TAIR:AT1G03740.1); Has 122706 Blast hits to
121395 proteins in 4473 species: Archae - 82; Bacteria -
13422; Metazoa - 46349; Fungi - 12470; Plants - 30311;
Viruses - 462; Other Eukaryotes - 19610 (source: NCBI
BLink)."
/db_xref="GeneID:834452"
/db_xref="TAIR:AT5G44290"
/db_xref="Araport:AT5G44290"
ORIGIN
1 mgciiskkks pkrnppwket lekrssrins sriddssqtk eeqdrsnkvr liesekfsss
61 rfsekhqeia eigdtdeded ddhhppeelk repsvvipps petvskeael aagwpawlvs
121 vagealvnwt prrastfekl ekigqgtyss vykardltnn kivalkrvrf dlsdlesvkf
181 mareiivmrr ldhpnvlkle glitasvsss lylvfeymdh dlvglasipg ikfsepqvkc
241 ymqqllsglh hchsrgvlhr dikgsnllid sngvlkiadf glatffdpqn cvpltsrvvt
301 lwyrppelll gachygvgvd lwstgcilge lysgkpilag kteveqlhki fklcgspted
361 ywrklklpps aafrpalpyg rrvaemfkdl ptnvlsllea llsidpdrrg saaralesey
421 frtepfacdp sslpkyppsk eidakirdda krqrptqekh erqdsqtrrs herklippvk
481 annpslstav enpylrscvp gnsqrqmqdm tcnnptsgrv shsgpmmknr nlsrltyvkd
541 naapripsyr ansagqgggy vgsdqqmmdq qrkelrtfnr adtmdnskrq tkipndpswy
601 dsgdnkmyms gpllaqprkv dqmleehdrq lqdftrqkak hcrn
//