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Protein kinase superfamily protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_001078708.1

Identical Proteins FASTA Graphics 

LOCUS       NP_001078708             644 aa            linear   PLN 20-OCT-2022
DEFINITION  Protein kinase superfamily protein [Arabidopsis thaliana].
ACCESSION   NP_001078708
VERSION     NP_001078708.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_001085239.2
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 644)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (residues 1 to 644)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 644)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 644)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AED95090.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..644
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     Protein         1..644
                     /product="Protein kinase superfamily protein"
                     /calculated_mol_wt=72817
     Region          137..421
                     /region_name="STKc_CDK9_like"
                     /note="Catalytic domain of Cyclin-Dependent protein Kinase
                     9-like Serine/Threonine Kinases; cd07840"
                     /db_xref="CDD:270832"
     Site            order(143..146,151,164,166,183,197,215..218,221,223..224,
                     261,263,265..266,268,279,282,295,297..300,302,340..341)
                     /site_type="active"
                     /db_xref="CDD:270832"
     Site            order(143..146,151,164,166,197,215..218,221,224,265..266,
                     268,279)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:270832"
     Site            order(175..177,179,182,186,189,199..202,204,211)
                     /site_type="other"
                     /note="CDK/cyclin interface [polypeptide binding]"
                     /db_xref="CDD:270832"
     Site            order(183,223,261,263,282,295,297..300,302,340..341)
                     /site_type="other"
                     /note="polypeptide substrate binding site [polypeptide
                     binding]"
                     /db_xref="CDD:270832"
     Site            order(278..289,294..302)
                     /site_type="other"
                     /note="activation loop (A-loop)"
                     /db_xref="CDD:270832"
     CDS             1..644
                     /locus_tag="AT5G44290"
                     /gene_synonym="K9L2.5; K9L2_5"
                     /coded_by="NM_001085239.2:279..2213"
                     /inference="Similar to RNA sequence,
                     EST:INSD:EH977750.1,INSD:AV805134.1,INSD:EL083240.1,
                     INSD:EH982466.1,INSD:CD531298.1,INSD:EH960043.1,
                     INSD:EL326022.1,INSD:AV800599.1,INSD:AV796377.1,
                     INSD:BP783559.1,INSD:EH825814.1,INSD:BP606760.1,
                     INSD:CD530181.1,INSD:CB256240.1,INSD:EG497821.1,
                     INSD:ES209174.1,INSD:AV809502.1,INSD:BP631621.1,
                     INSD:EL264492.1,INSD:ES019070.1,INSD:EH860008.1,
                     INSD:EG478393.1,INSD:BP788121.1,INSD:BP778742.1,
                     INSD:BP611907.1,INSD:EL051604.1,INSD:EH936535.1,
                     INSD:EG453310.1,INSD:AV790805.1,INSD:EL045798.1,
                     INSD:EL068779.1,INSD:EL212789.1,INSD:EL187784.1,
                     INSD:EL012712.1,INSD:AV805533.1,INSD:EH796843.1,
                     INSD:DR234029.1,INSD:DR362379.1,INSD:EH796008.1,
                     INSD:AV547216.1,INSD:EL054929.1,INSD:AI998987.1,
                     INSD:EL209682.1,INSD:EG454232.1,INSD:AV810365.1,
                     INSD:EL252762.1,INSD:ES024514.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT002282.1,INSD:BX833301.1"
                     /note="Protein kinase superfamily protein; FUNCTIONS IN:
                     protein serine/threonine kinase activity, protein kinase
                     activity, kinase activity, ATP binding; INVOLVED IN:
                     protein amino acid phosphorylation; LOCATED IN: plasma
                     membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
                     DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
                     Protein kinase, ATP binding site (InterPro:IPR017441),
                     Protein kinase, catalytic domain (InterPro:IPR000719),
                     Serine/threonine-protein kinase domain
                     (InterPro:IPR002290), Serine/threonine-protein kinase-like
                     domain (InterPro:IPR017442), Protein kinase-like domain
                     (InterPro:IPR011009), Serine/threonine-protein kinase,
                     active site (InterPro:IPR008271); BEST Arabidopsis
                     thaliana protein match is: Protein kinase superfamily
                     protein (TAIR:AT1G03740.1); Has 122706 Blast hits to
                     121395 proteins in 4473 species: Archae - 82; Bacteria -
                     13422; Metazoa - 46349; Fungi - 12470; Plants - 30311;
                     Viruses - 462; Other Eukaryotes - 19610 (source: NCBI
                     BLink)."
                     /db_xref="GeneID:834452"
                     /db_xref="TAIR:AT5G44290"
                     /db_xref="Araport:AT5G44290"
ORIGIN      
        1 mgciiskkks pkrnppwket lekrssrins sriddssqtk eeqdrsnkvr liesekfsss
       61 rfsekhqeia eigdtdeded ddhhppeelk repsvvipps petvskeael aagwpawlvs
      121 vagealvnwt prrastfekl ekigqgtyss vykardltnn kivalkrvrf dlsdlesvkf
      181 mareiivmrr ldhpnvlkle glitasvsss lylvfeymdh dlvglasipg ikfsepqvkc
      241 ymqqllsglh hchsrgvlhr dikgsnllid sngvlkiadf glatffdpqn cvpltsrvvt
      301 lwyrppelll gachygvgvd lwstgcilge lysgkpilag kteveqlhki fklcgspted
      361 ywrklklpps aafrpalpyg rrvaemfkdl ptnvlsllea llsidpdrrg saaralesey
      421 frtepfacdp sslpkyppsk eidakirdda krqrptqekh erqdsqtrrs herklippvk
      481 annpslstav enpylrscvp gnsqrqmqdm tcnnptsgrv shsgpmmknr nlsrltyvkd
      541 naapripsyr ansagqgggy vgsdqqmmdq qrkelrtfnr adtmdnskrq tkipndpswy
      601 dsgdnkmyms gpllaqprkv dqmleehdrq lqdftrqkak hcrn
//
Feature
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Protein clusters for NP_001078708.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT5G44290 gene (NM_001085239.2).
  • RefSeq protein isoforms
    See 7 reference sequence protein isoforms for the AT5G44290 gene.

More about the AT5G44290 gene

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