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P-loop containing nucleoside triphosphate hydrolases superfamily protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_001322013.1

Identical Proteins FASTA Graphics 

LOCUS       NP_001322013            1166 aa            linear   PLN 20-OCT-2022
DEFINITION  P-loop containing nucleoside triphosphate hydrolases superfamily
            protein [Arabidopsis thaliana].
ACCESSION   NP_001322013
VERSION     NP_001322013.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_001332481.1
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 1166)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 1166)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 1166)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 1166)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 1166)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to ANM59670.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..1166
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..1166
                     /product="P-loop containing nucleoside triphosphate
                     hydrolases superfamily protein"
                     /calculated_mol_wt=132903
     Region          <205..369
                     /region_name="PTZ00121"
                     /note="MAEBL; Provisional"
                     /db_xref="CDD:173412"
     Region          518..739
                     /region_name="DEADc_DDX46"
                     /note="DEAD-box helicase domain of DEAD box protein 46;
                     cd17953"
                     /db_xref="CDD:350711"
     Site            order(531,549,551..553,556,574..580,686..687)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350711"
     Region          750..880
                     /region_name="SF2_C_DEAD"
                     /note="C-terminal helicase domain of the DEAD box
                     helicases; cd18787"
                     /db_xref="CDD:350174"
     Site            order(839,841,866,869..870)
                     /site_type="other"
                     /note="ATP binding site [chemical binding]"
                     /db_xref="CDD:350174"
     Region          1063..1165
                     /region_name="KH-I_AtRH42_like"
                     /note="type I K homology (KH) RNA-binding domain found in
                     Arabidopsis thaliana DEAD-box ATP-dependent RNA helicase
                     RH42 and similar proteins; cd22475"
                     /db_xref="CDD:411903"
     CDS             1..1166
                     /locus_tag="AT1G20920"
                     /gene_synonym="F9H16.10; F9H16_10; RCF1; regulator of CBF
                     gene expression 1"
                     /coded_by="NM_001332481.1:150..3650"
                     /db_xref="Araport:AT1G20920"
                     /db_xref="GeneID:838685"
                     /db_xref="TAIR:AT1G20920"
ORIGIN      
        1 mevekskyrs edldvveeea dlkksrrdrd rsnerkkdkg sekrrekdrr kkrvkssdse
       61 ddydrdddee rekrkekere rrrrdkdrvk rrserrkssd seddveeede rdkrrvneke
      121 rghreherdr gkdrkrdrer eerkdkerer ekdrerrere reerekervk ererreredg
      181 erdrrereke rgsrrnrere rsrevgnees dddvkrdlkr rrkeggerke kereksvgrs
      241 srhedspkrk svedngekke kktreeeled eqkkldeeve krrrrvqewq elkrkkeeae
      301 seskgdadgn epkagkawtl egesddeegh peeksetemd vdeetkpend gdakmvdlen
      361 etaatvsesg gdgavdeeei dpldafmntm vlpevekfcn gapppavndg tldskmngke
      421 sgdrpkkgfn kalgriiqge dsdsdysepk ndddpslded deefmkrvkk tkaeklslvd
      481 hskieyepfr knfyievkdi srmtqeevnt yrkelelkvh gkdvprpikf whqtgltski
      541 ldtmkklnye kpmpiqtqal piimsgrdci gvaktgsgkt lgfvlpmlrh ikdqppveag
      601 dgpiglvmap trelvqqihs dirkfskplg ircvpvyggs gvaqqiselk rgteivvctp
      661 grmidilcts sgkitnlrrv tflvmdeadr mfdmgfepqi triiqnirpe rqtvlfsatf
      721 prqvetlark vlnkpveiqv ggrsvvnkdi tqlvevrpes drflrllell gewsekgkil
      781 vfvqsqekcd alyrdmikss ypclslhggk dqtdrestis dfkndvcnll iatsvaargl
      841 dvkelelvvn fdapnhyedy vhrvgrtgra grkgcavtfi seddakyapd lvkalelseq
      901 pvpddlkala dgfmvkvkqg ieqahgtgyg gsgfkfneee eevrkaakka qakeygfeed
      961 ksdsedendv vrkagggeis qqqatfaqia aiaaaakaaa aapvsapvta nqllangggl
     1021 aampgvlpvt vptlpsegag raaamvaamn lqhnlakiqa dampehyeae leindfpqna
     1081 rwkvthketl gpisewtgaa ittrgqfypt gripgpgerk lylfiegpse ksvkhakael
     1141 krvleditnq amsslpggas grysvl
//
Feature
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