LOCUS NP_196822 252 aa linear PLN 20-OCT-2022
DEFINITION NAC domain containing protein 83 [Arabidopsis thaliana].
ACCESSION NP_196822
VERSION NP_196822.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_121321.4
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 252)
AUTHORS Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
CONSRTM Kazusa DNA Research Institute; Cold Spring Harbor and Washington
University in St Louis Sequencing Consortium; European Union
Arabidopsis Genome Sequencing Consortium
TITLE Sequence and analysis of chromosome 5 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 823-826 (2000)
PUBMED 11130714
REFERENCE 2 (residues 1 to 252)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 252)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 252)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AED91860.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..252
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="5"
/ecotype="Columbia"
Protein 1..252
/product="NAC domain containing protein 83"
/calculated_mol_wt=28439
Region 15..138
/region_name="NAM"
/note="No apical meristem (NAM) protein; pfam02365"
/db_xref="CDD:460539"
CDS 1..252
/gene="NAC083"
/locus_tag="AT5G13180"
/gene_synonym="ANAC083; NAC domain containing protein 83;
T19L5.140; T19L5_140; VND-interacting 2; VNI2"
/coded_by="NM_121321.4:388..1146"
/inference="Similar to RNA sequence,
EST:INSD:EG498116.1,INSD:T43722.1,INSD:EG518085.1,
INSD:EH892667.1,INSD:DR357276.1,INSD:BP798961.1,
INSD:BP577161.1,INSD:DR749743.1,INSD:CD534939.1,
INSD:EG517452.1,INSD:EH900250.1,INSD:EH882256.1,
INSD:EH941307.1,INSD:BP572861.1,INSD:DR357277.1,
INSD:EL033505.1,INSD:BP793149.1,INSD:DR751398.1,
INSD:EL257852.1,INSD:EL259127.1,INSD:EL141744.1,
INSD:EH820618.1,INSD:EL134008.1,INSD:DR749744.1,
INSD:EL152233.1,INSD:EH835806.1,INSD:EH819989.1,
INSD:AV791472.1,INSD:EL131163.1,INSD:EG462618.1,
INSD:EH965182.1,INSD:EL057990.1,INSD:AV792849.1,
INSD:EH841007.1,INSD:AV783032.1,INSD:EL098054.1,
INSD:EL035957.1,INSD:EH869928.1,INSD:EL217651.1,
INSD:EL089099.1,INSD:EL316216.1,INSD:EH800982.1,
INSD:EL116310.1,INSD:BP571754.1,INSD:EL234954.1,
INSD:AV808232.1,INSD:EH856005.1,INSD:EH876066.1,
INSD:R30592.1,INSD:AV790850.1,INSD:EL141271.1,
INSD:EH801577.1,INSD:BP798051.1,INSD:EH855583.1,
INSD:DR751397.1,INSD:ES157494.1,INSD:EG518074.1,
INSD:EH934487.1,INSD:EL063686.1,INSD:BP574301.1,
INSD:EL239293.1,INSD:EL173797.1,INSD:EH795977.1,
INSD:EG521112.1,INSD:EL065759.1,INSD:T44589.1,
INSD:BP783923.1,INSD:N37811.1,INSD:EL019626.1,
INSD:EH816412.1,INSD:BP851550.1,INSD:EL200725.1,
INSD:EG521268.1,INSD:AV822309.1,INSD:DR363851.1,
INSD:EL066750.1,INSD:EH947783.1,INSD:EH968556.1,
INSD:EG462620.1,INSD:EH807956.1,INSD:BP571988.1,
INSD:ES166873.1,INSD:EL070626.1,INSD:EL106992.1,
INSD:EH824795.1"
/inference="similar to RNA sequence,
mRNA:INSD:AF385734.1,INSD:AY143964.1,INSD:BX831715.1"
/note="NAC domain containing protein 83 (NAC083); CONTAINS
InterPro DOMAIN/s: No apical meristem (NAM) protein
(InterPro:IPR003441); BEST Arabidopsis thaliana protein
match is: NAC domain containing protein 41
(TAIR:AT2G33480.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink)."
/db_xref="GeneID:831157"
/db_xref="TAIR:AT5G13180"
/db_xref="Araport:AT5G13180"
ORIGIN
1 mdnvklvkng vlrlppgfrf hptdeelvvq ylkrkvcssp lpasiipefd vcradpwdlp
61 gnlekeryff streakypng nrsnratgsg ywkatgidkr vvtsrgnqiv glkktlvfyk
121 gkpphgsrtd wimheyrlss sppssmgptq nwvlcriflk kragnknddd dgdsrnlrhn
181 nnnnssdqie iittdqtddk tkpiffdfmr kerttdlnll psspssdhas sgvtteifss
241 sdeetsscns fr
//