LOCUS NP_181749 375 aa linear PLN 20-OCT-2022
DEFINITION squamosa promoter binding protein-like 9 [Arabidopsis thaliana].
ACCESSION NP_181749
VERSION NP_181749.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_129782.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 375)
AUTHORS Lin,X., Kaul,S., Rounsley,S., Shea,T.P., Benito,M.I., Town,C.D.,
Fujii,C.Y., Mason,T., Bowman,C.L., Barnstead,M., Feldblyum,T.V.,
Buell,C.R., Ketchum,K.A., Lee,J., Ronning,C.M., Koo,H.L.,
Moffat,K.S., Cronin,L.A., Shen,M., Pai,G., Van Aken,S., Umayam,L.,
Tallon,L.J., Gill,J.E., Adams,M.D., Carrera,A.J., Creasy,T.H.,
Goodman,H.M., Somerville,C.R., Copenhaver,G.P., Preuss,D.,
Nierman,W.C., White,O., Eisen,J.A., Salzberg,S.L., Fraser,C.M. and
Venter,J.C.
TITLE Sequence and analysis of chromosome 2 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 761-768 (1999)
PUBMED 10617197
REFERENCE 2 (residues 1 to 375)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 375)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 375)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEC10085.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..375
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="2"
/ecotype="Columbia"
Protein 1..375
/product="squamosa promoter binding protein-like 9"
/calculated_mol_wt=40716
Region 74..148
/region_name="SBP"
/note="SBP domain; pfam03110"
/db_xref="CDD:460809"
CDS 1..375
/gene="SPL9"
/locus_tag="AT2G42200"
/gene_synonym="AtSPL9; squamosa promoter binding
protein-like 9; T24P15.11; T24P15_11"
/coded_by="NM_129782.3:433..1560"
/inference="Similar to RNA sequence,
EST:INSD:DR266999.1,INSD:AV532232.1,INSD:AV557527.1,
INSD:CB263324.1,INSD:DR266997.1,INSD:DR266996.1,
INSD:DR266993.1,INSD:DR266992.1,INSD:DR750739.1,
INSD:AV558614.1,INSD:AV557658.1,INSD:DR266998.1,
INSD:DR375055.1,INSD:AV534842.1,INSD:AV564109.1,
INSD:DR266991.1,INSD:AI999403.1,INSD:AV821557.1,
INSD:AV562658.1,INSD:DR266990.1,INSD:DR266995.1,
INSD:AV782054.1,INSD:DR266994.1"
/inference="similar to RNA sequence,
mRNA:INSD:AJ628864.1,INSD:AJ011638.1,INSD:AY150378.1,
INSD:AY046007.1"
/note="squamosa promoter binding protein-like 9 (SPL9);
FUNCTIONS IN: sequence-specific DNA binding transcription
factor activity; INVOLVED IN: vegetative to reproductive
phase transition of meristem, regulation of leaf
formation, leaf development, regulation of transcription;
LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 12 growth stages; CONTAINS InterPro
DOMAIN/s: Transcription factor, SBP-box
(InterPro:IPR004333); BEST Arabidopsis thaliana protein
match is: squamosa promoter binding protein-like 15
(TAIR:AT3G57920.1); Has 3664 Blast hits to 3108 proteins
in 157 species: Archae - 2; Bacteria - 85; Metazoa - 116;
Fungi - 125; Plants - 880; Viruses - 2; Other Eukaryotes -
2454 (source: NCBI BLink)."
/db_xref="Araport:AT2G42200"
/db_xref="GeneID:818820"
/db_xref="TAIR:AT2G42200"
ORIGIN
1 memgsnsgpg hgpgqaesgg sstesssfsg glmfgqkiyf edggggsgss ssggrsnrrv
61 rgggsgqsgq iprcqvegcg mdltnakgyy srhrvcgvhs ktpkvtvagi eqrfcqqcsr
121 fhqlpefdle krscrrrlag hnerrrkpqp aslsvlasry griapslyen gdagmngsfl
181 gnqeigwpss rtldtrvmrr pvsspswqin pmnvfsqgsv ggggtsfssp eimdtklesy
241 kgigdsncal sllsnphqph dnnnnnnnnn nnnnntwras sgfgpmtvtm aqpppapsqh
301 qylnppwvfk dndndmspvl nlgrytepdn cqissgtamg efelsdhhhq srrqymeden
361 traydssshh tnwsl
//