U.S. flag

An official website of the United States government

RNA-binding protein 27 isoform X2 [Rattus norvegicus]

NCBI Reference Sequence: XP_006254740.1

Identical Proteins FASTA Graphics 

LOCUS       XP_006254740            1011 aa            linear   ROD 22-FEB-2024
DEFINITION  RNA-binding protein 27 isoform X2 [Rattus norvegicus].
ACCESSION   XP_006254740
VERSION     XP_006254740.1
DBLINK      BioProject: PRJNA1074393
DBSOURCE    REFSEQ: accession XM_006254678.5
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086036) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1011
                     /organism="Rattus norvegicus"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     Protein         1..1011
                     /product="RNA-binding protein 27 isoform X2"
                     /calculated_mol_wt=113360
     Region          7..70
                     /region_name="PWI"
                     /note="PWI domain; pfam01480"
                     /db_xref="CDD:460224"
     Region          276..299
                     /region_name="zf-CCCH"
                     /note="Zinc finger C-x8-C-x5-C-x3-H type (and similar);
                     pfam00642"
                     /db_xref="CDD:459885"
     Region          544..619
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     Region          <751..>878
                     /region_name="PRK03918"
                     /note="DNA double-strand break repair ATPase Rad50"
                     /db_xref="CDD:235175"
     Region          916..958
                     /region_name="RRM_SF"
                     /note="RNA recognition motif (RRM) superfamily; cl17169"
                     /db_xref="CDD:473069"
     CDS             1..1011
                     /gene="Rbm27"
                     /coded_by="XM_006254678.5:214..3249"
                     /db_xref="GeneID:361317"
                     /db_xref="RGD:1311966"
ORIGIN      
        1 mliedvdalk swlakllepi cdadpsalan yvvalvkkdk pekelkafca dqldvflqke
       61 tsgfvdklfe slytknylpp lepvkpepkp lvqekeeike evfqepaeee rdvrkkkyps
      121 pqksrsesse rrtrekkred gkwrdyeryy ernelyreky dwrrgrsksr sksrglsrsr
      181 srsrgrskdr dpnrnvehre rskfksernd lessyvpvsa pppnsseqys sgaqsipstv
      241 tviapahhse ntteswsnyy nnhsssnsfg rnpppkrrcr dydergfcvl gdlcqfdhgn
      301 dplvvdeval psmipfpppp pglppppppg mlmppmpgpg pgpgpgpgpg pgpgpgpghs
      361 mrlpvpqghg qpppsvvlpi prppisqssl insrdqpgts avpnlapvga rlppplpqnl
      421 lytvsentye pdgynpeaps itssgrsqyr qffsraqtqr pnligltsgd mdanpraani
      481 viqteppvpv sinsnitrvv lepesrkrai sglegpltkk pwlgkqgnnn qskpgflrkn
      541 qytntklevk kipqelnnit klnehfskfg tivniqvafk gdpeaaliqy ltneearkai
      601 ssteavlnnr firvlwhren neqpalqssa qillqqqhtl shlsqqhhnl pqhlhpqqvm
      661 vtqsspssvh ggiqkmmgkp qtsgayvlnk vpvkhrlgha ttnqsdtshl lnqtggssgd
      721 dcpvfstpgh pktiysssnl kapsklcsgs kshdvqevlk kkqeamklqq dmrkkrqeml
      781 ekqiecqkml iskleknknm kpeeranimk tlkelgekis qlkdelktss avstpskvkt
      841 kteaqkelld teldlhkrls sgedttelrk klsqlqveaa rlgilpvgrg ktmssqgrgr
      901 grgrgrgrgs lnhmvvdhrp kalpaggfie eekeellqhf satnqsskfk drrlqiswhk
      961 pkvpsistet eeeevkeevk sairetetsd lflhdddded edeyesrswr r
//
Feature
Display: FASTA GenBank Help
Details

Supplemental Content

Change region shown

Customize view

Reference sequence information

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
External link. Please review our privacy policy.