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E3 ubiquitin ligase BIG BROTHER-related [Brachypodium distachyon]

NCBI Reference Sequence: XP_003578515.1

Identical Proteins FASTA Graphics 

LOCUS       XP_003578515             337 aa            linear   PLN 27-MAR-2018
DEFINITION  E3 ubiquitin ligase BIG BROTHER-related [Brachypodium distachyon].
ACCESSION   XP_003578515
VERSION     XP_003578515.1
DBLINK      BioProject: PRJNA74771
DBSOURCE    REFSEQ: accession XM_003578467.4
KEYWORDS    RefSeq.
SOURCE      Brachypodium distachyon (stiff brome)
  ORGANISM  Brachypodium distachyon
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Pooideae; Stipodae; Brachypodieae; Brachypodium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_016134.3) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Brachypodium distachyon Annotation
                                           Release 103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..337
                     /organism="Brachypodium distachyon"
                     /strain="Bd21"
                     /db_xref="taxon:15368"
                     /chromosome="4"
     Protein         1..337
                     /product="E3 ubiquitin ligase BIG BROTHER-related"
                     /calculated_mol_wt=36397
     Region          279..330
                     /region_name="RING_Ubox"
                     /note="RING finger (Really Interesting New Gene) domain
                     and U-box domain superfamily; cl17238"
                     /db_xref="CDD:473075"
     Site            order(285,288,303,305,308,311,322,325)
                     /site_type="other"
                     /note="cross-brace motif"
                     /db_xref="CDD:438477"
     CDS             1..337
                     /gene="LOC100829650"
                     /coded_by="XM_003578467.4:122..1135"
                     /db_xref="GeneID:100829650"
ORIGIN      
        1 medskgsggg drpsadhnps qnqpppvavs ggdddaaaaa aaaaaasaea edearrpfta
       61 lsqvdadlal arvlqeqera ymmlrmnggg ggegsdygss eagsyeydee aeedyeeele
      121 hhlrvhhheh ttgdggdgdg daeeeeegee gegegsegse yeeegfeede dveemepevd
      181 paeyeddeay aralqdaeer evaarllala gisdwraveh veehvndaqd swqevdpdey
      241 syeelvalge vvgtesrgls adtlaslpsv tyktkdvqdg nteqcvicrv efeegeslva
      301 lpckhsyhpd cinqwlqink vcpmcsaevs tsenkqa
//
Feature
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Protein clusters for XP_003578515.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the LOC100829650 gene (XM_003578467.4).

More about the gene LOC100829650

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