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NCBI Reference Sequence: XP_001335593.3
Identical Proteins FASTA Graphics
LOCUS XP_001335593 590 aa linear VRT 08-SEP-2024 DEFINITION transcription factor RelB isoform X1 [Danio rerio]. ACCESSION XP_001335593 VERSION XP_001335593.3 DBLINK BioProject: PRJNA13922 DBSOURCE REFSEQ: accession XM_001335557.6 KEYWORDS RefSeq. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_018395321.1) annotated using gene prediction method: Gnomon, supported by EST evidence. Also see: Documentation of NCBI's Annotation Process On Jun 15, 2017 this sequence version replaced XP_001335593.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_000002035.6-RS_2024_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/15/2024 ##Genome-Annotation-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..590 /organism="Danio rerio" /strain="Tuebingen" /db_xref="taxon:7955" /chromosome="15" /map="unlocalized" Protein 1..590 /product="transcription factor RelB isoform X1" /calculated_mol_wt=65945 Region 134..306 /region_name="RHD-n" /note="N-terminal sub-domain of the Rel homology domain (RHD); cl08275" /db_xref="CDD:447596" Site order(148,150..151,153..154,156..159,239,241..242,306) /site_type="DNA binding" /note="DNA binding site [nucleotide binding]" /db_xref="CDD:143640" Region 314..410 /region_name="RHD_dimer" /note="Rel homology dimerization domain; pfam16179" /db_xref="CDD:465045" CDS 1..590 /gene="relb" /coded_by="XM_001335557.6:128..1900" /db_xref="GeneID:795414" /db_xref="ZFIN:ZDB-GENE-030131-9531" ORIGIN 1 mkdmnipngk aangdleldl ineyllektn keltitlpgp ppppvdqdiq avnppprnrr 61 ttnnpvlvsr gtapqnslsf dqvptahadg maamqsirga kgssqrrgla svatqrripq 121 qtgtehlemf lekpdlvvve qpkergmrfr yecegrsags ilgasstdsn ktlpaieiqg 181 pidnikkvmv tvslvtkdip yrphphclvg kdctdgicvi hinphsnrrh sfanlgiqcv 241 rrkeldaslq krrnknidpf ntghsksied mdmnvvrlcf qceleqkngd ritlnpvvsn 301 piydkkattt aelkinrlnv irgpctgkte iymlcdkvqk ddieiifsie dweakaefaq 361 tdvhrqiaiv fksppfreqd ileetevnvc lrrmsdrmds epvkftyvpd nadpygvnrk 421 rkmktdvkfs escnipqsqd llmndpgtsq qfdpfyptpe cnvssapiav plqdggihmp 481 sltveemlyn edfkqedgci smdqealssf llqclgphgs dqvynqlsse lnlvldgadi 541 nvnqtmlnma sindahfsqm vsenqpypad lenieefmfs svktennpdl //
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Conserved Domains
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