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transcription factor RelB isoform X1 [Danio rerio]

NCBI Reference Sequence: XP_001335593.3

Identical Proteins FASTA Graphics 

LOCUS       XP_001335593             590 aa            linear   VRT 08-SEP-2024
DEFINITION  transcription factor RelB isoform X1 [Danio rerio].
ACCESSION   XP_001335593
VERSION     XP_001335593.3
DBLINK      BioProject: PRJNA13922
DBSOURCE    REFSEQ: accession XM_001335557.6
KEYWORDS    RefSeq.
SOURCE      Danio rerio (zebrafish)
  ORGANISM  Danio rerio
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Danionidae; Danioninae; Danio.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_018395321.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 15, 2017 this sequence version replaced XP_001335593.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_000002035.6-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/15/2024
            ##Genome-Annotation-Data-END##
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Danio rerio"
                     /strain="Tuebingen"
                     /db_xref="taxon:7955"
                     /chromosome="15"
                     /map="unlocalized"
     Protein         1..590
                     /product="transcription factor RelB isoform X1"
                     /calculated_mol_wt=65945
     Region          134..306
                     /region_name="RHD-n"
                     /note="N-terminal sub-domain of the Rel homology domain
                     (RHD); cl08275"
                     /db_xref="CDD:447596"
     Site            order(148,150..151,153..154,156..159,239,241..242,306)
                     /site_type="DNA binding"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:143640"
     Region          314..410
                     /region_name="RHD_dimer"
                     /note="Rel homology dimerization domain; pfam16179"
                     /db_xref="CDD:465045"
     CDS             1..590
                     /gene="relb"
                     /coded_by="XM_001335557.6:128..1900"
                     /db_xref="GeneID:795414"
                     /db_xref="ZFIN:ZDB-GENE-030131-9531"
ORIGIN      
        1 mkdmnipngk aangdleldl ineyllektn keltitlpgp ppppvdqdiq avnppprnrr
       61 ttnnpvlvsr gtapqnslsf dqvptahadg maamqsirga kgssqrrgla svatqrripq
      121 qtgtehlemf lekpdlvvve qpkergmrfr yecegrsags ilgasstdsn ktlpaieiqg
      181 pidnikkvmv tvslvtkdip yrphphclvg kdctdgicvi hinphsnrrh sfanlgiqcv
      241 rrkeldaslq krrnknidpf ntghsksied mdmnvvrlcf qceleqkngd ritlnpvvsn
      301 piydkkattt aelkinrlnv irgpctgkte iymlcdkvqk ddieiifsie dweakaefaq
      361 tdvhrqiaiv fksppfreqd ileetevnvc lrrmsdrmds epvkftyvpd nadpygvnrk
      421 rkmktdvkfs escnipqsqd llmndpgtsq qfdpfyptpe cnvssapiav plqdggihmp
      481 sltveemlyn edfkqedgci smdqealssf llqclgphgs dqvynqlsse lnlvldgadi
      541 nvnqtmlnma sindahfsqm vsenqpypad lenieefmfs svktennpdl
//
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