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MarR family transcriptional regulator [Escherichia coli]

GenBank: RSE15594.1

Identical Proteins FASTA Graphics 

LOCUS       RSE15594                  85 aa            linear   BCT 12-DEC-2018
DEFINITION  MarR family transcriptional regulator [Escherichia coli].
ACCESSION   RSE15594
VERSION     RSE15594.1
DBLINK      BioProject: PRJNA497126
            BioSample: SAMN10248954
DBSOURCE    accession RHWM01000016.1
KEYWORDS    .
SOURCE      Escherichia coli
  ORGANISM  Escherichia coli
            Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria;
            Enterobacterales; Enterobacteriaceae; Escherichia.
REFERENCE   1  (residues 1 to 85)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Transmission dynamics of multidrug resistant bacteria on intensive
            care unit surfaces
  JOURNAL   Unpublished
REFERENCE   2  (residues 1 to 85)
  AUTHORS   D'Souza,A.W., Potter,R.F., Wallace,M., Shupe,A., Patel,S., Sun,S.,
            Gul,D., Kwon,J.H., Andleeb,S., Burnham,C.-A.D. and Dantas,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-OCT-2018) Computational and Systems Biology,
            Washington University in St. Louis School of Medicine, 660 South
            Euclid Avenue, St. Louis, MO 63110, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: SPAdes v. 3.11.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 35x
            Sequencing Technology  :: Illumina NextSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 11/14/2018 00:58:09
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 5,241
            CDS (total)                       :: 5,139
            Genes (coding)                    :: 4,948
            CDS (coding)                      :: 4,948
            Genes (RNA)                       :: 102
            rRNAs                             :: 2, 2, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 2, 1, 1 (5S, 16S, 23S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 83
            ncRNAs                            :: 14
            Pseudo Genes (total)              :: 191
            Pseudo Genes (ambiguous residues) :: 1 of 191
            Pseudo Genes (frameshifted)       :: 79 of 191
            Pseudo Genes (incomplete)         :: 102 of 191
            Pseudo Genes (internal stop)      :: 37 of 191
            Pseudo Genes (multiple problems)  :: 26 of 191
            CRISPR Arrays                     :: 2
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..85
                     /organism="Escherichia coli"
                     /strain="EC_US_18"
                     /isolation_source="alcohol foam dispenser in hospital
                     intensive care unit"
                     /db_xref="taxon:562"
                     /geo_loc_name="USA"
                     /collection_date="2016-03"
     Protein         1..85
                     /product="MarR family transcriptional regulator"
     CDS             1..85
                     /locus_tag="EGT78_12055"
                     /coded_by="RHWM01000016.1:21425..21682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001521776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mtitivefnv lkvmaekdid wswmvldrtl airnipgfgn vanivtklvn hglvdivnge
       61 gnsrpryrvs qyglnlikeq qdnlf
//
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