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RecName: Full=RING-H2 finger protein ATL74; AltName: Full=RING-type E3 ubiquitin transferase ATL74

UniProtKB/Swiss-Prot: Q9LZV8.1

Identical Proteins FASTA Graphics 

LOCUS       ATL74_ARATH              159 aa            linear   PLN 02-OCT-2024
DEFINITION  RecName: Full=RING-H2 finger protein ATL74; AltName: Full=RING-type
            E3 ubiquitin transferase ATL74.
ACCESSION   Q9LZV8
VERSION     Q9LZV8.1
DBSOURCE    UniProtKB: locus ATL74_ARATH, accession Q9LZV8;
            class: standard.
            created: Jul 5, 2005.
            sequence updated: Oct 1, 2000.
            annotation updated: Oct 2, 2024.
            xrefs: AL162351.1, CAB82758.1, CP002688.1, AED90404.1, BT010682.1,
            AAR20739.1, BT010973.1, AAR24751.1, T48209, NP_195808.1
            xrefs (non-sequence databases): AlphaFoldDB:Q9LZV8, SMR:Q9LZV8,
            PaxDb:3702-AT5G01880.1, ProteomicsDB:246577,
            EnsemblPlants:AT5G01880.1, EnsemblPlants:AT5G01880.1,
            EnsemblPlants:AT5G01880, GeneID:831691, Gramene:AT5G01880.1,
            KEGG:ath:AT5G01880, Araport:AT5G01880, TAIR:AT5G01880,
            eggNOG:KOG0800, HOGENOM:CLU_013137_9_3_1, InParanoid:Q9LZV8,
            OMA:RILPECC, OrthoDB:5474929at2759, PhylomeDB:Q9LZV8,
            UniPathway:UPA00143, PRO:PR:Q9LZV8, Proteomes:UP000006548,
            ExpressionAtlas:Q9LZV8, GO:0016020, GO:0046872, GO:0016740,
            GO:0016567, CDD:cd16461, Gene3D:3.30.40.10, InterPro:IPR044602,
            InterPro:IPR001841, InterPro:IPR013083, PANTHER:PTHR46905:SF22,
            PANTHER:PTHR46905, Pfam:PF13639, SMART:SM00184, SUPFAM:SSF57850,
            PROSITE:PS50089
KEYWORDS    Membrane; Metal-binding; Reference proteome; Transferase;
            Transmembrane; Transmembrane helix; Ubl conjugation pathway; Zinc;
            Zinc-finger.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 159)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
  REMARK    NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].;
            STRAIN=cv. Columbia
REFERENCE   2  (residues 1 to 159)
  AUTHORS   Cheng,C.Y., Krishnakumar,V., Chan,A.P., Thibaud-Nissen,F.,
            Schobel,S. and Town,C.D.
  TITLE     Araport11: a complete reannotation of the Arabidopsis thaliana
            reference genome
  JOURNAL   Plant J 89 (4), 789-804 (2017)
   PUBMED   27862469
  REMARK    GENOME REANNOTATION.;
            STRAIN=cv. Columbia
REFERENCE   3  (residues 1 to 159)
  AUTHORS   Shinn,P., Chen,H., Cheuk,R.F., Kim,C.J. and Ecker,J.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (??-DEC-2003) to the EMBL/GenBank/DDBJ databases
  REMARK    NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].;
            STRAIN=cv. Columbia
REFERENCE   4  (residues 1 to 159)
  AUTHORS   Kosarev,P., Mayer,K.F. and Hardtke,C.S.
  TITLE     Evaluation and classification of RING-finger domains encoded by the
            Arabidopsis genome
  JOURNAL   Genome Biol 3 (4), RESEARCH0016 (2002)
   PUBMED   11983057
  REMARK    GENE FAMILY ORGANIZATION.
REFERENCE   5  (residues 1 to 159)
  AUTHORS   Serrano,M., Parra,S., Alcaraz,L.D. and Guzman,P.
  TITLE     The ATL gene family from Arabidopsis thaliana and Oryza sativa
            comprises a large number of putative ubiquitin ligases of the
            RING-H2 type
  JOURNAL   J Mol Evol 62 (4), 434-445 (2006)
   PUBMED   16557337
  REMARK    NOMENCLATURE, AND GENE FAMILY ORGANIZATION.
COMMENT     On Jul 5, 2005 this sequence version replaced gi:11358136.
            [CATALYTIC ACTIVITY] Reaction=S-ubiquitinyl-[E2
            ubiquitin-conjugating enzyme]-L-cysteine + [acceptor
            protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine +
            N(6)-ubiquitinyl-[acceptor protein]-L-lysine.; EC=2.3.2.27;
            Evidence={ECO:0000305}.
            [PATHWAY] Protein modification; protein ubiquitination.
            [SUBCELLULAR LOCATION] Membrane {ECO:0000305}; Single-pass membrane
            protein {ECO:0000305}.
            [DOMAIN] The RING-type zinc finger domain mediates binding to an E2
            ubiquitin-conjugating enzyme. {ECO:0000250}.
            [SIMILARITY] Belongs to the RING-type zinc finger family. ATL
            subfamily. {ECO:0000305}.
FEATURES             Location/Qualifiers
     source          1..159
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
     gene            1..159
                     /gene="ATL74"
                     /locus_tag="At5g01880"
                     /gene_synonym="T20L15_150"
     Protein         1..159
                     /product="RING-H2 finger protein ATL74"
                     /EC_number="2.3.2.27"
                     /note="RING-type E3 ubiquitin transferase ATL74"
                     /UniProtKB_evidence="Evidence at transcript level"
     Region          1..159
                     /region_name="Mature chain"
                     /note="RING-H2 finger protein ATL74. /id=PRO_0000055807."
     Region          35..55
                     /region_name="Transmembrane region"
                     /note="Helical. /evidence=ECO:0000255."
     Region          104..147
                     /region_name="RING-H2_EL5-like"
                     /note="RING finger, H2 subclass, found in rice E3
                     ubiquitin-protein ligase EL5 and similar proteins;
                     cd16461"
                     /db_xref="CDD:438124"
     Region          105..147
                     /region_name="Zinc finger region"
                     /note="RING-type; atypical.
                     /evidence=ECO:0000255|PROSITE-ProRule:PRU00175."
     Site            132..137
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:438124"
ORIGIN      
        1 mhrllleshg ggnetsgsgg gdgytrdmnf danmviilaa llcalilalg lnsilrcamr
       61 cgfglsssaa agtvadragl kkrelkkfpv aeygsgevki aatecaiclg efadgervrv
      121 lppcnhsfhm scidtwlvsh sscpncrhsl ievhvagse
//
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Reference sequence information

  • RefSeq protein
    See the reference protein sequence for RING/U-box superfamily protein (NP_195808.1).

More about the AT5G01880 gene

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