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MAG: ATP synthase F0 subunit C [Fervidicoccus fontis]

GenBank: PMB76891.1

Identical Proteins FASTA Graphics 

LOCUS       PMB76891                  83 aa            linear   ENV 10-JAN-2018
DEFINITION  MAG: ATP synthase F0 subunit C [Fervidicoccus fontis].
ACCESSION   PMB76891
VERSION     PMB76891.1
DBLINK      BioProject: PRJNA419931
            BioSample: SAMN08107305
DBSOURCE    accession PNIV01000100.1
KEYWORDS    ENV; Metagenome Assembled Genome; MAG.
SOURCE      Fervidicoccus fontis (hot springs metagenome)
  ORGANISM  Fervidicoccus fontis
            Archaea; Thermoproteota; Thermoprotei; Fervidicoccales;
            Fervidicoccaceae; Fervidicoccus.
REFERENCE   1  (residues 1 to 83)
  AUTHORS   Wilkins,L.G.E., Ettinger,C.L., Jospin,G. and Eisen,J.A.
  TITLE     Metagenome-assembled genomes provide new insight into the microbial
            diversity of two thermal pools in Kamchatka, Russia
  JOURNAL   Sci Rep 9 (1), 3059 (2019)
   PUBMED   30816235
  REMARK    Erratum:[Sci Rep. 2020 Feb 21;10(1):3454. PMID: 32081994]
            Publication Status: Online-Only
REFERENCE   2  (residues 1 to 83)
  AUTHORS   Wilkins,L. and Ettinger,C.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-JAN-2018) ESPM, UC Berkeley, Mulford Hall, Berkeley,
            CA 94720, USA
COMMENT     Annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (released 2013). Information about the Pipeline can be
            found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: 22-MAY-2017
            Assembly Method        :: SPAdes v. 3.9.0
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 0.771604938x
            Sequencing Technology  :: Solexa3 84bp paired-end sequencing
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2018 14:22:08
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS+
            Annotation Software revision      :: 4.3
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Genes (total)                     :: 1,492
            CDS (total)                       :: 1,463
            Genes (coding)                    :: 1,436
            CDS (coding)                      :: 1,436
            Genes (RNA)                       :: 29
            tRNAs                             :: 29
            ncRNAs                            :: 0
            Pseudo Genes (total)              :: 27
            Pseudo Genes (ambiguous residues) :: 0 of 27
            Pseudo Genes (frameshifted)       :: 12 of 27
            Pseudo Genes (incomplete)         :: 16 of 27
            Pseudo Genes (internal stop)      :: 4 of 27
            Pseudo Genes (multiple problems)  :: 5 of 27
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..83
                     /organism="Fervidicoccus fontis"
                     /isolate="ARK-12"
                     /isolation_source="hot spring"
                     /db_xref="taxon:683846"
                     /environmental_sample
                     /geo_loc_name="Russia: Uzon Caldera, Kamchatka, Arkashin
                     hot spring"
                     /lat_lon="54.30 N 160.02 E"
                     /collection_date="Aug-2004"
                     /collected_by="Elizabeth Burgess"
                     /metagenome_source="hot springs metagenome"
                     /note="metagenomic"
     Protein         1..83
                     /product="ATP synthase F0 subunit C"
     Region          <37..80
                     /region_name="AtpE"
                     /note="FoF1-type ATP synthase, membrane subunit
                     c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy
                     production and conversion]; COG0636"
                     /db_xref="CDD:440401"
     CDS             1..83
                     /gene="atpE"
                     /locus_tag="C0177_04785"
                     /coded_by="PNIV01000100.1:4288..4539"
                     /inference="COORDINATES: protein motif:HMM:PF00137.19"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /transl_table=11
ORIGIN      
        1 mdavsinlgl aqlgagvaig faaagggagm gilggyflta larqpellgp lrtymilvlv
       61 fieaqvlygf tvsmillfaa pkh
//
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