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GenBank: PMB76891.1
Identical Proteins FASTA Graphics
LOCUS PMB76891 83 aa linear ENV 10-JAN-2018 DEFINITION MAG: ATP synthase F0 subunit C [Fervidicoccus fontis]. ACCESSION PMB76891 VERSION PMB76891.1 DBLINK BioProject: PRJNA419931 BioSample: SAMN08107305 DBSOURCE accession PNIV01000100.1 KEYWORDS ENV; Metagenome Assembled Genome; MAG. SOURCE Fervidicoccus fontis (hot springs metagenome) ORGANISM Fervidicoccus fontis Archaea; Thermoproteota; Thermoprotei; Fervidicoccales; Fervidicoccaceae; Fervidicoccus. REFERENCE 1 (residues 1 to 83) AUTHORS Wilkins,L.G.E., Ettinger,C.L., Jospin,G. and Eisen,J.A. TITLE Metagenome-assembled genomes provide new insight into the microbial diversity of two thermal pools in Kamchatka, Russia JOURNAL Sci Rep 9 (1), 3059 (2019) PUBMED 30816235 REMARK Erratum:[Sci Rep. 2020 Feb 21;10(1):3454. PMID: 32081994] Publication Status: Online-Only REFERENCE 2 (residues 1 to 83) AUTHORS Wilkins,L. and Ettinger,C. TITLE Direct Submission JOURNAL Submitted (04-JAN-2018) ESPM, UC Berkeley, Mulford Hall, Berkeley, CA 94720, USA COMMENT Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Assembly-Data-START## Assembly Date :: 22-MAY-2017 Assembly Method :: SPAdes v. 3.9.0 Genome Representation :: Full Expected Final Version :: Yes Genome Coverage :: 0.771604938x Sequencing Technology :: Solexa3 84bp paired-end sequencing ##Genome-Assembly-Data-END## ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Date :: 01/05/2018 14:22:08 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline Annotation Method :: Best-placed reference protein set; GeneMarkS+ Annotation Software revision :: 4.3 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA; repeat_region Genes (total) :: 1,492 CDS (total) :: 1,463 Genes (coding) :: 1,436 CDS (coding) :: 1,436 Genes (RNA) :: 29 tRNAs :: 29 ncRNAs :: 0 Pseudo Genes (total) :: 27 Pseudo Genes (ambiguous residues) :: 0 of 27 Pseudo Genes (frameshifted) :: 12 of 27 Pseudo Genes (incomplete) :: 16 of 27 Pseudo Genes (internal stop) :: 4 of 27 Pseudo Genes (multiple problems) :: 5 of 27 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..83 /organism="Fervidicoccus fontis" /isolate="ARK-12" /isolation_source="hot spring" /db_xref="taxon:683846" /environmental_sample /geo_loc_name="Russia: Uzon Caldera, Kamchatka, Arkashin hot spring" /lat_lon="54.30 N 160.02 E" /collection_date="Aug-2004" /collected_by="Elizabeth Burgess" /metagenome_source="hot springs metagenome" /note="metagenomic" Protein 1..83 /product="ATP synthase F0 subunit C" Region <37..80 /region_name="AtpE" /note="FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K [Energy production and conversion]; COG0636" /db_xref="CDD:440401" CDS 1..83 /gene="atpE" /locus_tag="C0177_04785" /coded_by="PNIV01000100.1:4288..4539" /inference="COORDINATES: protein motif:HMM:PF00137.19" /note="Derived by automated computational analysis using gene prediction method: Protein Homology." /transl_table=11 ORIGIN 1 mdavsinlgl aqlgagvaig faaagggagm gilggyflta larqpellgp lrtymilvlv 61 fieaqvlygf tvsmillfaa pkh //
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Conserved Domains
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