LOCUS NP_998595 231 aa linear VRT 16-SEP-2024
DEFINITION group XIIB secretory phospholipase A2-like protein precursor [Danio
rerio].
ACCESSION NP_998595 NP_998372
VERSION NP_998595.2
DBSOURCE REFSEQ: accession NM_213430.1
KEYWORDS RefSeq.
SOURCE Danio rerio (zebrafish)
ORGANISM Danio rerio
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
Cypriniformes; Danionidae; Danioninae; Danio.
REFERENCE 1 (residues 1 to 231)
AUTHORS Feng,J., Chen,X., Wang,S., Zhang,J., Wang,Q., Guo,S. and Shen,Q.
TITLE Transcriptomics integrated with metabolomics reveals the
ameliorating effect of mussel-derived plasmalogens on high-fat
diet-induced hyperlipidemia in zebrafish
JOURNAL Food Funct 14 (8), 3641-3658 (2023)
PUBMED 36961308
REMARK Publication Status: Online-Only
REFERENCE 2 (residues 1 to 231)
AUTHORS Jawahar,J., McCumber,A.W., Lickwar,C.R., Amoroso,C.R., de la Torre
Canny,S.G., Wong,S., Morash,M., Thierer,J.H., Farber,S.A.,
Bohannan,B.J.M., Guillemin,K. and Rawls,J.F.
TITLE Starvation causes changes in the intestinal transcriptome and
microbiome that are reversed upon refeeding
JOURNAL BMC Genomics 23 (1), 225 (2022)
PUBMED 35317738
REMARK Publication Status: Online-Only
REFERENCE 3 (residues 1 to 231)
AUTHORS White,R.J., Mackay,E., Wilson,S.W. and Busch-Nentwich,E.M.
TITLE Allele-specific gene expression can underlie altered transcript
abundance in zebrafish mutants
JOURNAL Elife 11, e72825 (2022)
PUBMED 35175196
REMARK Publication Status: Online-Only
REFERENCE 4 (residues 1 to 231)
AUTHORS Feng,J., Song,G., Wu,Y., Chen,X., Pang,J., Xu,Y., Shen,Q., Guo,S.
and Zhang,M.
TITLE Plasmalogens improve swimming performance by modulating the
expression of genes involved in amino acid and lipid metabolism,
oxidative stress, and ferroptosis in an Alzheimer's disease
zebrafish model
JOURNAL Food Funct 12 (23), 12087-12097 (2021)
PUBMED 34783821
REMARK Publication Status: Online-Only
REFERENCE 5 (residues 1 to 231)
AUTHORS Thierer,J.H., Ekker,S.C. and Farber,S.A.
TITLE The LipoGlo reporter system for sensitive and specific monitoring
of atherogenic lipoproteins
JOURNAL Nat Commun 10 (1), 3426 (2019)
PUBMED 31366908
REMARK Erratum:[Nat Commun. 2020 Jul 21;11(1):3707. PMID: 32694507]
Publication Status: Online-Only
REFERENCE 6 (residues 1 to 231)
AUTHORS Anderson,J.L., Mulligan,T.S., Shen,M.C., Wang,H., Scahill,C.M.,
Tan,F.J., Du,S.J., Busch-Nentwich,E.M. and Farber,S.A.
TITLE mRNA processing in mutant zebrafish lines generated by chemical and
CRISPR-mediated mutagenesis produces unexpected transcripts that
escape nonsense-mediated decay
JOURNAL PLoS Genet 13 (11), e1007105 (2017)
PUBMED 29161261
REMARK Publication Status: Online-Only
REFERENCE 7 (residues 1 to 231)
AUTHORS Elkon,R., Milon,B., Morrison,L., Shah,M., Vijayakumar,S.,
Racherla,M., Leitch,C.C., Silipino,L., Hadi,S., Weiss-Gayet,M.,
Barras,E., Schmid,C.D., Ait-Lounis,A., Barnes,A., Song,Y.,
Eisenman,D.J., Eliyahu,E., Frolenkov,G.I., Strome,S.E., Durand,B.,
Zaghloul,N.A., Jones,S.M., Reith,W. and Hertzano,R.
TITLE RFX transcription factors are essential for hearing in mice
JOURNAL Nat Commun 6, 8549 (2015)
PUBMED 26469318
REMARK Publication Status: Online-Only
REFERENCE 8 (residues 1 to 231)
AUTHORS Kessels,M.Y., Huitema,L.F., Boeren,S., Kranenbarg,S.,
Schulte-Merker,S., van Leeuwen,J.L. and de Vries,S.C.
TITLE Proteomics analysis of the zebrafish skeletal extracellular matrix
JOURNAL PLoS One 9 (3), e90568 (2014)
PUBMED 24608635
REMARK Publication Status: Online-Only
REFERENCE 9 (residues 1 to 231)
AUTHORS Jima,D.D., Shah,R.N., Orcutt,T.M., Joshi,D., Law,J.M., Litman,G.W.,
Trede,N.S. and Yoder,J.A.
TITLE Enhanced transcription of complement and coagulation genes in the
absence of adaptive immunity
JOURNAL Mol Immunol 46 (7), 1505-1516 (2009)
PUBMED 19200601
REFERENCE 10 (residues 1 to 231)
AUTHORS Woods,I.G., Wilson,C., Friedlander,B., Chang,P., Reyes,D.K.,
Nix,R., Kelly,P.D., Chu,F., Postlethwait,J.H. and Talbot,W.S.
TITLE The zebrafish gene map defines ancestral vertebrate chromosomes
JOURNAL Genome Res 15 (9), 1307-1314 (2005)
PUBMED 16109975
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. The reference sequence was derived from BC052113.1.
On or before Apr 30, 2008 this sequence version replaced
NP_998372.1, NP_998595.1.
##Evidence-Data-START##
Transcript exon combination :: BC052113.1, BC065857.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMEA3505370, SAMEA3505371
[ECO:0000348]
##Evidence-Data-END##
FEATURES Location/Qualifiers
source 1..231
/organism="Danio rerio"
/db_xref="taxon:7955"
/chromosome="13"
/map="13"
Protein 1..231
/product="group XIIB secretory phospholipase A2-like
protein precursor"
/EC_number="3.1.1.4"
/calculated_mol_wt=22351
sig_peptide 1..28
/inference="COORDINATES: ab initio prediction:SignalP:6.0"
/calculated_mol_wt=2870
Region 60..231
/region_name="PLA2G12"
/note="Group XII secretory phospholipase A2 precursor
(PLA2G12); pfam06951"
/db_xref="CDD:399731"
CDS 1..231
/gene="pla2g12b"
/gene_synonym="wu:fb26d02; wu:fb99g06; wu:fc91d12;
zgc:111897; zgc:56487; zgc:77746"
/coded_by="NM_213430.1:62..757"
/db_xref="GeneID:406739"
/db_xref="ZFIN:ZDB-GENE-040426-2771"
ORIGIN
1 mfpralplll lcisaglaat liqasvdaas vdspagespd vnqenqaehv lmadapvegk
61 papsateese ddddwgfgsi rgslqsvngy fdsilelmgg rdgvcqfrcr ygkapqprpg
121 yqmsepdgcs tsllgfqfdm gvpamtkccn qldicyetcg snkyrcdtkf rwclhsicgd
181 lkkslglmsk veacetfadt myntvwtlgc rpfmngqras cycegeekde l
//