LOCUS NP_849501 857 aa linear PLN 20-OCT-2022
DEFINITION phospholipase D delta [Arabidopsis thaliana].
ACCESSION NP_849501
VERSION NP_849501.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_179170.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 857)
AUTHORS Mayer,K., Schuller,C., Wambutt,R., Murphy,G., Volckaert,G.,
Pohl,T., Dusterhoft,A., Stiekema,W., Entian,K.D., Terryn,N.,
Harris,B., Ansorge,W., Brandt,P., Grivell,L., Rieger,M.,
Weichselgartner,M., de Simone,V., Obermaier,B., Mache,R.,
Muller,M., Kreis,M., Delseny,M., Puigdomenech,P., Watson,M.,
Schmidtheini,T., Reichert,B., Portatelle,D., Perez-Alonso,M.,
Boutry,M., Bancroft,I., Vos,P., Hoheisel,J., Zimmermann,W.,
Wedler,H., Ridley,P., Langham,S.A., McCullagh,B., Bilham,L.,
Robben,J., Van der Schueren,J., Grymonprez,B., Chuang,Y.J.,
Vandenbussche,F., Braeken,M., Weltjens,I., Voet,M., Bastiaens,I.,
Aert,R., Defoor,E., Weitzenegger,T., Bothe,G., Ramsperger,U.,
Hilbert,H., Braun,M., Holzer,E., Brandt,A., Peters,S., van
Staveren,M., Dirske,W., Mooijman,P., Klein Lankhorst,R., Rose,M.,
Hauf,J., Kotter,P., Berneiser,S., Hempel,S., Feldpausch,M.,
Lamberth,S., Van den Daele,H., De Keyser,A., Buysshaert,C.,
Gielen,J., Villarroel,R., De Clercq,R., Van Montagu,M., Rogers,J.,
Cronin,A., Quail,M., Bray-Allen,S., Clark,L., Doggett,J., Hall,S.,
Kay,M., Lennard,N., McLay,K., Mayes,R., Pettett,A.,
Rajandream,M.A., Lyne,M., Benes,V., Rechmann,S., Borkova,D.,
Blocker,H., Scharfe,M., Grimm,M., Lohnert,T.H., Dose,S., de
Haan,M., Maarse,A., Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M.,
Fartmann,B., Granderath,K., Dauner,D., Herzl,A., Neumann,S.,
Argiriou,A., Vitale,D., Liguori,R., Piravandi,E., Massenet,O.,
Quigley,F., Clabauld,G., Mundlein,A., Felber,R., Schnabl,S.,
Hiller,R., Schmidt,W., Lecharny,A., Aubourg,S., Chefdor,F.,
Cooke,R., Berger,C., Montfort,A., Casacuberta,E., Gibbons,T.,
Weber,N., Vandenbol,M., Bargues,M., Terol,J., Torres,A.,
Perez-Perez,A., Purnelle,B., Bent,E., Johnson,S., Tacon,D.,
Jesse,T., Heijnen,L., Schwarz,S., Scholler,P., Heber,S., Francs,P.,
Bielke,C., Frishman,D., Haase,D., Lemcke,K., Mewes,H.W.,
Stocker,S., Zaccaria,P., Bevan,M., Wilson,R.K., de la Bastide,M.,
Habermann,K., Parnell,L., Dedhia,N., Gnoj,L., Schutz,K., Huang,E.,
Spiegel,L., Sehkon,M., Murray,J., Sheet,P., Cordes,M.,
Abu-Threideh,J., Stoneking,T., Kalicki,J., Graves,T., Harmon,G.,
Edwards,J., Latreille,P., Courtney,L., Cloud,J., Abbott,A.,
Scott,K., Johnson,D., Minx,P., Bentley,D., Fulton,B., Miller,N.,
Greco,T., Kemp,K., Kramer,J., Fulton,L., Mardis,E., Dante,M.,
Pepin,K., Hillier,L., Nelson,J., Spieth,J., Ryan,E., Andrews,S.,
Geisel,C., Layman,D., Du,H., Ali,J., Berghoff,A., Jones,K.,
Drone,K., Cotton,M., Joshu,C., Antonoiu,B., Zidanic,M., Strong,C.,
Sun,H., Lamar,B., Yordan,C., Ma,P., Zhong,J., Preston,R., Vil,D.,
Shekher,M., Matero,A., Shah,R., Swaby,I.K., O'Shaughnessy,A.,
Rodriguez,M., Hoffmann,J., Till,S., Granat,S., Shohdy,N.,
Hasegawa,A., Hameed,A., Lodhi,M., Johnson,A., Chen,E., Marra,M.,
Martienssen,R. and McCombie,W.R.
TITLE Sequence and analysis of chromosome 4 of the plant Arabidopsis
thaliana
JOURNAL Nature 402 (6763), 769-777 (1999)
PUBMED 10617198
REFERENCE 2 (residues 1 to 857)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 857)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 857)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE86571.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..857
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="4"
/ecotype="Columbia"
Protein 1..857
/product="phospholipase D delta"
/calculated_mol_wt=97648
Region 1..857
/region_name="PLN03008"
/note="Phospholipase D delta"
/db_xref="CDD:178585"
CDS 1..857
/gene="PLDDELTA"
/locus_tag="AT4G35790"
/gene_synonym="ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA;
ATPLDDELTA; F4B14.60; F4B14_60; PHOSPHOLIPASE D;
phospholipase D delta"
/coded_by="NM_179170.3:533..3106"
/inference="Similar to RNA sequence,
EST:INSD:DR358888.1,INSD:BP818415.1,INSD:EL290574.1,
INSD:EG502921.1,INSD:BP578827.1,INSD:AV523982.1,
INSD:EH816436.1,INSD:BP611260.1,INSD:BP578912.1,
INSD:AV821046.1,INSD:EL109869.1,INSD:BP577537.1,
INSD:EL018768.1,INSD:BP574166.1,INSD:BP571590.1,
INSD:BP813395.1,INSD:AV812664.1,INSD:AV803857.1,
INSD:AV528921.1,INSD:AV530191.1,INSD:AV796517.1,
INSD:EL226343.1,INSD:AV523529.1,INSD:AV524312.1,
INSD:N65741.1,INSD:W43871.1,INSD:DR358891.1,
INSD:BP620014.1,INSD:BP778925.1,INSD:BP617540.1,
INSD:AV523199.1,INSD:BP588509.1,INSD:BP596442.1,
INSD:AV794698.1,INSD:W43825.1,INSD:BP566754.1,
INSD:AV817969.1,INSD:BP571504.1,INSD:BP580806.1,
INSD:BP810454.1,INSD:AV541429.1,INSD:AV796459.1,
INSD:AV820190.1,INSD:EG467254.1,INSD:BP583149.1,
INSD:AI993659.1,INSD:DR350430.1,INSD:BP862372.1,
INSD:EG467255.1,INSD:AV541436.1,INSD:DR358890.1,
INSD:BP567833.1,INSD:AV831838.1,INSD:AV815935.1,
INSD:EH884023.1,INSD:BP566939.1,INSD:AV563252.1,
INSD:BP822635.1,INSD:EH962130.1,INSD:BP799864.1,
INSD:EL132610.1,INSD:AV820442.1,INSD:BP584546.1,
INSD:EH833471.1,INSD:BP798870.1,INSD:BP564173.1,
INSD:BP581492.1,INSD:BP581677.1,INSD:N96688.1,
INSD:BP599363.1,INSD:BP576162.1,INSD:DR350431.1,
INSD:AV820574.1,INSD:ES062593.1,INSD:AV815379.1,
INSD:BP622099.1,INSD:BP573241.1,INSD:EL240968.1,
INSD:BP644497.1,INSD:AV546717.1,INSD:EH839301.1,
INSD:EL085572.1,INSD:DR358889.1,INSD:BP800530.1,
INSD:AV810448.1,INSD:ES204827.1,INSD:AV524302.1,
INSD:DR350429.1,INSD:BP580781.1,INSD:AV811192.1,
INSD:N96112.1,INSD:AA651235.1,INSD:AV563251.1,
INSD:CF652514.1,INSD:BP583325.1,INSD:BP582021.1,
INSD:EG477498.1,INSD:EL023095.1,INSD:BP802868.1,
INSD:BP600737.1,INSD:BP574562.1,INSD:BP618541.1,
INSD:BE526043.1,INSD:EL193090.1,INSD:EL025503.1,
INSD:BE525672.1,INSD:AV528036.1,INSD:BP577295.1,
INSD:BP618720.1,INSD:BP780452.1,INSD:BP618091.1,
INSD:EL092800.1,INSD:BP821832.1,INSD:DR358892.1,
INSD:ES182781.1,INSD:BP570858.1,INSD:W43543.1,
INSD:EH989874.1,INSD:BP601581.1,INSD:ES092443.1,
INSD:EL041781.1,INSD:EL990033.1,INSD:EL250708.1,
INSD:ES117444.1,INSD:BP803341.1,INSD:ES019492.1,
INSD:AV529219.1,INSD:BP809701.1,INSD:AV523692.1,
INSD:BP799796.1,INSD:BP562494.2,INSD:EL021570.1,
INSD:AV529434.1,INSD:BP810643.1,INSD:EL113321.1,
INSD:AV820058.1,INSD:BP804543.1,INSD:BP564590.1,
INSD:EL022795.1,INSD:BP583890.1,INSD:BP615872.1,
INSD:EL260028.1,INSD:ES063542.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF274239.1,INSD:AF322228.1,INSD:AF306345.1,
INSD:AY113045.1,INSD:AK227213.1,INSD:AF424632.1"
/note="ARABIDOPSIS THALIANA PHOSPHOLIPASE D DELTA
(ATPLDDELTA); FUNCTIONS IN: phospholipase D activity;
INVOLVED IN: response to water deprivation, response to
cold, hyperosmotic salinity response, phosphatidic acid
metabolic process, programmed cell death; LOCATED IN:
microtubule cytoskeleton, plasma membrane, vacuole,
membrane; EXPRESSED IN: 31 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: C2
membrane targeting protein (InterPro:IPR018029), C2
calcium/lipid-binding domain, CaLB (InterPro:IPR008973),
Phospholipase D (InterPro:IPR015679), Phospholipase D,
plant (InterPro:IPR011402), Phospholipase
D/Transphosphatidylase (InterPro:IPR001736), C2
calcium-dependent membrane targeting (InterPro:IPR000008);
BEST Arabidopsis thaliana protein match is: phospholipase
D beta 1 (TAIR:AT2G42010.1); Has 2426 Blast hits to 1986
proteins in 434 species: Archae - 0; Bacteria - 499;
Metazoa - 513; Fungi - 443; Plants - 789; Viruses - 0;
Other Eukaryotes - 182 (source: NCBI BLink)."
/db_xref="GeneID:829733"
/db_xref="TAIR:AT4G35790"
/db_xref="Araport:AT4G35790"
ORIGIN
1 maekvsedvm llhgdldlki vkarrlpnmd mfsehlrrlf tacnacarpt dtddvdprdk
61 gefgdknirs hrkvitsdpy vtvvvpqatl artrvlknsq eplwdekfni siahpfayle
121 fqvkdddvfg aqiigtakip vrdiasgeri sgwfpvlgas gkppkaetai fidmkftpfd
181 qihsyrcgia gdperrgvrr tyfpvrkgsq vrlyqdahvm dgtlpaigld ngkvyehgkc
241 wedicyaise ahhmiyivgw sifhkiklvr etkvprdkdm tlgellkyks qegvrvlllv
301 wddktshdkf giktpgvmgt hdeetrkffk hssvicvlsp ryassklglf kqqvvgtlft
361 hhqkcvlvdt qavgnnrkvt afiggldlcd grydtpehri lhdldtvfkd dfhnptfpag
421 tkaprqpwhd lhcridgpaa ydvlinfeqr wrkatrwkef slrlkgkthw qddalirigr
481 iswilspvfk flkdgtsiip eddpcvwvsk eddpenwhvq ifrsidsgsv kgfpkyedea
541 eaqhlecakr lvvdksiqta yiqtirsaqh fiyienqyfl gssyawpsyr dagadnlipm
601 elalkivski rakerfavyv viplwpegdp ksgpvqeily wqsqtmqmmy dviakelkav
661 qsdahpldyl nfyclgkreq lpddmpatng svvsdsynfq rfmiyvhakg mivddeyvlm
721 gsaninqrsm agtkdteiam gayqpnhtwa hkgrhprgqv ygyrmslwae hlgktgdefv
781 epsdleclkk vntiseenwk rfidpkfsel qghlikyplq vdvdgkvspl pdyetfpdvg
841 gkiigahsma lpdtltt
//