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NAD(P)-linked oxidoreductase superfamily protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_563770.1

Identical Proteins FASTA Graphics 

LOCUS       NP_563770                377 aa            linear   PLN 20-OCT-2022
DEFINITION  NAD(P)-linked oxidoreductase superfamily protein [Arabidopsis
            thaliana].
ACCESSION   NP_563770
VERSION     NP_563770.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_100546.4
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 377)
  AUTHORS   Theologis,A., Ecker,J.R., Palm,C.J., Federspiel,N.A., Kaul,S.,
            White,O., Alonso,J., Altafi,H., Araujo,R., Bowman,C.L.,
            Brooks,S.Y., Buehler,E., Chan,A., Chao,Q., Chen,H., Cheuk,R.F.,
            Chin,C.W., Chung,M.K., Conn,L., Conway,A.B., Conway,A.R.,
            Creasy,T.H., Dewar,K., Dunn,P., Etgu,P., Feldblyum,T.V., Feng,J.,
            Fong,B., Fujii,C.Y., Gill,J.E., Goldsmith,A.D., Haas,B.,
            Hansen,N.F., Hughes,B., Huizar,L., Hunter,J.L., Jenkins,J.,
            Johnson-Hopson,C., Khan,S., Khaykin,E., Kim,C.J., Koo,H.L.,
            Kremenetskaia,I., Kurtz,D.B., Kwan,A., Lam,B., Langin-Hooper,S.,
            Lee,A., Lee,J.M., Lenz,C.A., Li,J.H., Li,Y., Lin,X., Liu,S.X.,
            Liu,Z.A., Luros,J.S., Maiti,R., Marziali,A., Militscher,J.,
            Miranda,M., Nguyen,M., Nierman,W.C., Osborne,B.I., Pai,G.,
            Peterson,J., Pham,P.K., Rizzo,M., Rooney,T., Rowley,D., Sakano,H.,
            Salzberg,S.L., Schwartz,J.R., Shinn,P., Southwick,A.M., Sun,H.,
            Tallon,L.J., Tambunga,G., Toriumi,M.J., Town,C.D., Utterback,T.,
            Van Aken,S., Vaysberg,M., Vysotskaia,V.S., Walker,M., Wu,D., Yu,G.,
            Fraser,C.M., Venter,J.C. and Davis,R.W.
  TITLE     Sequence and analysis of chromosome 1 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 816-820 (2000)
   PUBMED   11130712
REFERENCE   2  (residues 1 to 377)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 377)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-JUL-2017) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 377)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   5  (residues 1 to 377)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE28024.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..377
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="1"
                     /ecotype="Columbia"
     Protein         1..377
                     /product="NAD(P)-linked oxidoreductase superfamily
                     protein"
                     /calculated_mol_wt=41366
     Region          57..360
                     /region_name="AKR_AtPLR-like"
                     /note="Arabidopsis thaliana pyridoxal reductase (PLR) and
                     similar proteins; cd19093"
                     /db_xref="CDD:381319"
     Site            order(64..66,103,108,144,179..180,208..209,233,262..268,
                     315,331..336,339,342..343)
                     /site_type="active"
                     /note="putative active site [active]"
                     /db_xref="CDD:381319"
     Site            order(103,108,144,179)
                     /site_type="active"
                     /note="catalytic tetrad [active]"
                     /db_xref="CDD:381319"
     CDS             1..377
                     /locus_tag="AT1G06690"
                     /gene_synonym="F12K11.2; F12K11_2"
                     /coded_by="NM_100546.4:132..1265"
                     /inference="Similar to RNA sequence,
                     EST:INSD:BP785156.1,INSD:DR353006.1,INSD:ES112825.1,
                     INSD:EL181486.1,INSD:AV811323.1,INSD:AV793026.1,
                     INSD:EL028073.1,INSD:EH860964.1,INSD:AV793968.1,
                     INSD:EG498644.1,INSD:CB257514.1,INSD:AV823337.1,
                     INSD:DR353005.1,INSD:EL152876.1,INSD:EL223263.1,
                     INSD:DR380040.1,INSD:AV809176.1,INSD:AA394539.1,
                     INSD:EG498645.1,INSD:EH857903.1,INSD:ES120769.1,
                     INSD:EH987659.1,INSD:AV794673.1,INSD:EL048959.1,
                     INSD:DR353001.1,INSD:ES132771.1,INSD:AV811517.1,
                     INSD:ES103758.1,INSD:BP617554.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT001002.1,INSD:AY050325.1"
                     /note="NAD(P)-linked oxidoreductase superfamily protein;
                     FUNCTIONS IN: oxidoreductase activity, aldo-keto reductase
                     activity; INVOLVED IN: oxidation reduction; LOCATED IN:
                     chloroplast thylakoid membrane, chloroplast,
                     plastoglobule, chloroplast envelope; EXPRESSED IN: 22
                     plant structures; EXPRESSED DURING: 14 growth stages;
                     CONTAINS InterPro DOMAIN/s: Aldo/keto reductase
                     (InterPro:IPR001395), Aldo/keto reductase subgroup
                     (InterPro:IPR020471), Aldo/keto reductase, conserved site
                     (InterPro:IPR018170); BEST Arabidopsis thaliana protein
                     match is: NAD(P)-linked oxidoreductase superfamily protein
                     (TAIR:AT5G53580.1); Has 30017 Blast hits to 30001 proteins
                     in 2563 species: Archae - 570; Bacteria - 19734; Metazoa -
                     1881; Fungi - 2197; Plants - 1331; Viruses - 0; Other
                     Eukaryotes - 4304 (source: NCBI BLink)."
                     /db_xref="Araport:AT1G06690"
                     /db_xref="GeneID:837179"
                     /db_xref="TAIR:AT1G06690"
ORIGIN      
        1 mamathftfp fnyvvsegsh grrsfvrklv ravasgdsva paiseeskvk lggsdlkvtk
       61 lgigvwswgd nsywndfqwd drklkaakga fdtsldngid ffdtaevygs kfslgaisse
      121 tllgrfirer kerypgaevs vatkfaalpw rfgresvvta lkdslsrlel ssvdlyqlhw
      181 pglwgnegyl dglgdaveqg lvkavgvsny sekrlrdaye rlkkrgipla snqvnysliy
      241 rapeqtgvka acdelgvtli ayspiaqgal tgkytpenpp sgprgriytr efltklqpll
      301 nrikqigeny sktptqialn wlvaqgnvip ipgaknaeqa kefagaigws ltdnevselr
      361 slaseikpvv gfpveyl
//
Feature
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Protein clusters for NP_563770.1

Reference sequence information

  • RefSeq mRNA
    See reference mRNA sequence for the AT1G06690 gene (NM_100546.4).

More about the AT1G06690 gene

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