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MATE efflux family protein [Arabidopsis thaliana]

NCBI Reference Sequence: NP_197272.2

Identical Proteins FASTA Graphics 

LOCUS       NP_197272                497 aa            linear   PLN 20-OCT-2022
DEFINITION  MATE efflux family protein [Arabidopsis thaliana].
ACCESSION   NP_197272
VERSION     NP_197272.2
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_121776.5
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 497)
  AUTHORS   Tabata,S., Kaneko,T., Nakamura,Y., Kotani,H., Kato,T., Asamizu,E.,
            Miyajima,N., Sasamoto,S., Kimura,T., Hosouchi,T., Kawashima,K.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Naruo,K., Okumura,S., Shinpo,S., Takeuchi,C., Wada,T.,
            Watanabe,A., Yamada,M., Yasuda,M., Sato,S., de la Bastide,M.,
            Huang,E., Spiegel,L., Gnoj,L., O'Shaughnessy,A., Preston,R.,
            Habermann,K., Murray,J., Johnson,D., Rohlfing,T., Nelson,J.,
            Stoneking,T., Pepin,K., Spieth,J., Sekhon,M., Armstrong,J.,
            Becker,M., Belter,E., Cordum,H., Cordes,M., Courtney,L.,
            Courtney,W., Dante,M., Du,H., Edwards,J., Fryman,J., Haakensen,B.,
            Lamar,E., Latreille,P., Leonard,S., Meyer,R., Mulvaney,E.,
            Ozersky,P., Riley,A., Strowmatt,C., Wagner-McPherson,C., Wollam,A.,
            Yoakum,M., Bell,M., Dedhia,N., Parnell,L., Shah,R., Rodriguez,M.,
            See,L.H., Vil,D., Baker,J., Kirchoff,K., Toth,K., King,L.,
            Bahret,A., Miller,B., Marra,M., Martienssen,R., McCombie,W.R.,
            Wilson,R.K., Murphy,G., Bancroft,I., Volckaert,G., Wambutt,R.,
            Dusterhoft,A., Stiekema,W., Pohl,T., Entian,K.D., Terryn,N.,
            Hartley,N., Bent,E., Johnson,S., Langham,S.A., McCullagh,B.,
            Robben,J., Grymonprez,B., Zimmermann,W., Ramsperger,U., Wedler,H.,
            Balke,K., Wedler,E., Peters,S., van Staveren,M., Dirkse,W.,
            Mooijman,P., Lankhorst,R.K., Weitzenegger,T., Bothe,G., Rose,M.,
            Hauf,J., Berneiser,S., Hempel,S., Feldpausch,M., Lamberth,S.,
            Villarroel,R., Gielen,J., Ardiles,W., Bents,O., Lemcke,K.,
            Kolesov,G., Mayer,K., Rudd,S., Schoof,H., Schueller,C.,
            Zaccaria,P., Mewes,H.W., Bevan,M. and Fransz,P.
  CONSRTM   Kazusa DNA Research Institute; Cold Spring Harbor and Washington
            University in St Louis Sequencing Consortium; European Union
            Arabidopsis Genome Sequencing Consortium
  TITLE     Sequence and analysis of chromosome 5 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 823-826 (2000)
   PUBMED   11130714
REFERENCE   2  (residues 1 to 497)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 497)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 497)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AED92457.
            
            On Aug 20, 2002 this sequence version replaced NP_197272.1.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..497
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="5"
                     /ecotype="Columbia"
     Protein         1..497
                     /product="MATE efflux family protein"
                     /calculated_mol_wt=54489
     Region          34..469
                     /region_name="MATE_eukaryotic"
                     /note="Eukaryotic members of the multidrug and toxic
                     compound extrusion (MATE) family; cd13132"
                     /db_xref="CDD:240537"
     Site            order(272,276,304,307,386,390,417,443,447)
                     /site_type="other"
                     /note="putative cation binding site [ion binding]"
                     /db_xref="CDD:240537"
     CDS             1..497
                     /locus_tag="AT5G17700"
                     /gene_synonym="MVA3.5; MVA3_5"
                     /coded_by="NM_121776.5:268..1761"
                     /inference="Similar to RNA sequence,
                     EST:INSD:DR274333.1,INSD:BE530457.1,INSD:BP822605.1,
                     INSD:BP590334.1,INSD:BP652388.1,INSD:CF651425.1,
                     INSD:CF651424.1,INSD:DR274334.1,INSD:AV567311.1,
                     INSD:BP636323.1,INSD:BP824774.1,INSD:AV830289.1,
                     INSD:AV563642.1,INSD:BP581702.1,INSD:EH830701.1,
                     INSD:Z18054.1,INSD:BP573613.1,INSD:BP641704.1,
                     INSD:BP838539.1,INSD:BP823790.1,INSD:BP838890.1,
                     INSD:BP851335.1,INSD:AV566788.1,INSD:EH922587.1,
                     INSD:BP590366.1,INSD:AV811069.1,INSD:BP817974.1"
                     /inference="similar to RNA sequence,
                     mRNA:INSD:BT000259.1,INSD:AY099666.1"
                     /note="MATE efflux family protein; FUNCTIONS IN:
                     antiporter activity, drug transmembrane transporter
                     activity, transporter activity; INVOLVED IN: drug
                     transmembrane transport, transmembrane transport; LOCATED
                     IN: membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
                     DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s:
                     Multi antimicrobial extrusion protein MatE
                     (InterPro:IPR002528); BEST Arabidopsis thaliana protein
                     match is: MATE efflux family protein (TAIR:AT3G03620.1);
                     Has 30201 Blast hits to 17322 proteins in 780 species:
                     Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
                     3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
                     (source: NCBI BLink)."
                     /db_xref="GeneID:831637"
                     /db_xref="TAIR:AT5G17700"
                     /db_xref="Araport:AT5G17700"
ORIGIN      
        1 msggggemee rllngseteq rreslylrkk iwsevrkmwr ialpstlfrv msfgcvvvaq
       61 afighssetg laayallqst firfiygima gmssatetlc gqaygaeqyh mmgiylqrsw
      121 ivdtfiatlf vpfivlagpi lrllgqnvvi setvdeiypw vipylysivf tmtmqmylqa
      181 qmknaiigil stlalvldia atwwcvsvmg mgihgallgl nisswsvaia efvyvfggwc
      241 phtwtgfsta afldlipmlk lsissgfmlc leywymsiiv lmsgyakdan iaisafsicq
      301 yiyswemnic fglmgaacvr vanelgkgda davrfsikvv lvvsavigvi csalclafgg
      361 qisylfsdsq avsdavadls ivlsisilfn iiqpilsgva igagmqsmva lvnlasyyai
      421 gvplgvllvy vfnfgikglw sgmlagvgiq tlilcyviyk tdwelevkkt nermktwtln
      481 lpavqsttis trdeerk
//
Feature
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Protein clusters for NP_197272.2

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More about the AT5G17700 gene

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