LOCUS NP_191649 422 aa linear PLN 20-OCT-2022
DEFINITION FASCICLIN-like arabinogalactan-protein 10 [Arabidopsis thaliana].
ACCESSION NP_191649
VERSION NP_191649.1
DBLINK BioProject: PRJNA116
BioSample: SAMN03081427
DBSOURCE REFSEQ: accession NM_115954.3
KEYWORDS RefSeq.
SOURCE Arabidopsis thaliana (thale cress)
ORGANISM Arabidopsis thaliana
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
Camelineae; Arabidopsis.
REFERENCE 1 (residues 1 to 422)
AUTHORS Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
Yamada,M., Yasuda,M. and Tabata,S.
CONSRTM European Union Chromosome 3 Arabidopsis Sequencing Consortium;
Institute for Genomic Research; Kazusa DNA Research Institute
TITLE Sequence and analysis of chromosome 3 of the plant Arabidopsis
thaliana
JOURNAL Nature 408 (6814), 820-822 (2000)
PUBMED 11130713
REFERENCE 2 (residues 1 to 422)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (19-OCT-2022) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (residues 1 to 422)
AUTHORS Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
Vaughn,M. and Town,C.D.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
9704 Medical Center Dr, Rockville, MD 20850, USA
REMARK Protein update by submitter
REFERENCE 4 (residues 1 to 422)
AUTHORS Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
CONSRTM TAIR
TITLE Direct Submission
JOURNAL Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
Institution, 260 Panama Street, Stanford, CA, USA
COMMENT REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
The reference sequence is identical to AEE80125.
Method: conceptual translation.
FEATURES Location/Qualifiers
source 1..422
/organism="Arabidopsis thaliana"
/db_xref="taxon:3702"
/chromosome="3"
/ecotype="Columbia"
Protein 1..422
/product="FASCICLIN-like arabinogalactan-protein 10"
/calculated_mol_wt=43476
Region 198..329
/region_name="Fasciclin"
/note="Fasciclin domain; pfam02469"
/db_xref="CDD:396845"
Region 308..>399
/region_name="rad23"
/note="UV excision repair protein Rad23; TIGR00601"
/db_xref="CDD:273167"
CDS 1..422
/gene="FLA10"
/locus_tag="AT3G60900"
/gene_synonym="FASCICLIN-like arabinogalactan-protein 10"
/coded_by="NM_115954.3:399..1667"
/inference="Similar to RNA sequence,
EST:INSD:ES029438.1,INSD:BP639677.1,INSD:DR254293.1,
INSD:ES139949.1,INSD:ES153222.1,INSD:DR254300.1,
INSD:ES204078.1,INSD:ES138352.1,INSD:DR254296.1,
INSD:ES165177.1,INSD:DR254290.1,INSD:ES001736.1,
INSD:ES036564.1,INSD:ES142339.1,INSD:ES148936.1,
INSD:BP654021.1,INSD:ES086807.1,INSD:BP592016.1,
INSD:ES084777.1,INSD:ES149293.1,INSD:ES081195.1,
INSD:BP655456.1,INSD:ES017193.1,INSD:ES120493.1,
INSD:ES110318.1,INSD:BP560560.2,INSD:BP837055.1,
INSD:DR254288.1,INSD:DR254294.1,INSD:ES042934.1,
INSD:ES062902.1,INSD:EL992151.1,INSD:BP655025.1,
INSD:ES019258.1,INSD:BP586590.1,INSD:ES093532.1,
INSD:ES023213.1,INSD:ES081526.1,INSD:DR254298.1,
INSD:BP642714.1,INSD:EL978308.1,INSD:BP659192.1,
INSD:ES190076.1,INSD:BP832646.2,INSD:ES215415.1,
INSD:ES033106.1,INSD:ES090290.1,INSD:DR254297.1,
INSD:DR375935.1,INSD:AV781835.1,INSD:DR254299.1,
INSD:DR254287.1,INSD:CB260222.1,INSD:DR254302.1,
INSD:ES037351.1,INSD:BP641841.1,INSD:ES138873.1,
INSD:EL998073.1,INSD:BX839820.1,INSD:ES203099.1,
INSD:ES037821.1,INSD:BP829692.1,INSD:DR254291.1,
INSD:ES059115.1,INSD:AU236525.1,INSD:DR254292.1,
INSD:BP806872.1,INSD:BX835813.1,INSD:ES137555.1,
INSD:BP587222.1,INSD:ES157508.1,INSD:AU227476.1,
INSD:EL978563.1,INSD:ES140126.1,INSD:DR254295.1,
INSD:EL994554.1,INSD:DR254301.1,INSD:ES214770.1,
INSD:ES125386.1,INSD:AV551412.1,INSD:DR254289.1,
INSD:ES183841.1,INSD:ES215150.1,INSD:AV539067.1,
INSD:ES078192.1,INSD:EL977800.1,INSD:ES182188.1,
INSD:ES145922.1,INSD:ES061899.1,INSD:BP638002.1,
INSD:DR254303.1,INSD:ES048123.1,INSD:DR254286.1,
INSD:ES110926.1"
/inference="Similar to RNA sequence,
mRNA:INSD:AF378882.1,INSD:BX824335.1,INSD:AY087634.1,
INSD:AK228467.1"
/note="FASCICLIN-like arabinogalactan-protein 10 (FLA10);
LOCATED IN: anchored to plasma membrane, plasma membrane,
anchored to membrane; EXPRESSED IN: 17 plant structures;
EXPRESSED DURING: 8 growth stages; CONTAINS InterPro
DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST
Arabidopsis thaliana protein match is: FASCICLIN-like
arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 12874
Blast hits to 6768 proteins in 802 species: Archae - 107;
Bacteria - 3922; Metazoa - 1175; Fungi - 784; Plants -
2143; Viruses - 697; Other Eukaryotes - 4046 (source: NCBI
BLink)."
/db_xref="GeneID:825261"
/db_xref="TAIR:AT3G60900"
/db_xref="Araport:AT3G60900"
ORIGIN
1 matsraftlf aftlslltva stvsghnitq ilsdtpeyss fnnylsqtkl adeinsrtti
61 tvlvlnngam sslagkhpls vvknalsllv lldyydplkl hqlskgttlt ttlyqttgha
121 lgnlgfvnvt dlkggkvgfg saapgsklds sytksvkqip ynisvleina piiapgilta
181 papssagvsn itgllekagc ktfanllvss gviktfestv ekgltvfaps deafkargvp
241 dltnltqaev vslleyhala eykpkgslkt nkdaistlat ngagkydltt stsgdevilh
301 tgvgpsrlad tvvdetpvvi ftvdnvllpa elfgkssspa papepvsapt ptpakspspv
361 eapsptaasp pappvdessp egapsdspts sensnaknaa fhvnapalft alvtiaatsl
421 ll
//