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FASCICLIN-like arabinogalactan-protein 10 [Arabidopsis thaliana]

NCBI Reference Sequence: NP_191649.1

Identical Proteins FASTA Graphics 

LOCUS       NP_191649                422 aa            linear   PLN 20-OCT-2022
DEFINITION  FASCICLIN-like arabinogalactan-protein 10 [Arabidopsis thaliana].
ACCESSION   NP_191649
VERSION     NP_191649.1
DBLINK      BioProject: PRJNA116
            BioSample: SAMN03081427
DBSOURCE    REFSEQ: accession NM_115954.3
KEYWORDS    RefSeq.
SOURCE      Arabidopsis thaliana (thale cress)
  ORGANISM  Arabidopsis thaliana
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Brassicales; Brassicaceae;
            Camelineae; Arabidopsis.
REFERENCE   1  (residues 1 to 422)
  AUTHORS   Salanoubat,M., Lemcke,K., Rieger,M., Ansorge,W., Unseld,M.,
            Fartmann,B., Valle,G., Blocker,H., Perez-Alonso,M., Obermaier,B.,
            Delseny,M., Boutry,M., Grivell,L.A., Mache,R., Puigdomenech,P., De
            Simone,V., Choisne,N., Artiguenave,F., Robert,C., Brottier,P.,
            Wincker,P., Cattolico,L., Weissenbach,J., Saurin,W., Quetier,F.,
            Schafer,M., Muller-Auer,S., Gabel,C., Fuchs,M., Benes,V.,
            Wurmbach,E., Drzonek,H., Erfle,H., Jordan,N., Bangert,S.,
            Wiedelmann,R., Kranz,H., Voss,H., Holland,R., Brandt,P.,
            Nyakatura,G., Vezzi,A., D'Angelo,M., Pallavicini,A., Toppo,S.,
            Simionati,B., Conrad,A., Hornischer,K., Kauer,G., Lohnert,T.H.,
            Nordsiek,G., Reichelt,J., Scharfe,M., Schon,O., Bargues,M.,
            Terol,J., Climent,J., Navarro,P., Collado,C., Perez-Perez,A.,
            Ottenwalder,B., Duchemin,D., Cooke,R., Laudie,M., Berger-Llauro,C.,
            Purnelle,B., Masuy,D., de Haan,M., Maarse,A.C., Alcaraz,J.P.,
            Cottet,A., Casacuberta,E., Monfort,A., Argiriou,A., flores,M.,
            Liguori,R., Vitale,D., Mannhaupt,G., Haase,D., Schoof,H., Rudd,S.,
            Zaccaria,P., Mewes,H.W., Mayer,K.F., Kaul,S., Town,C.D., Koo,H.L.,
            Tallon,L.J., Jenkins,J., Rooney,T., Rizzo,M., Walts,A.,
            Utterback,T., Fujii,C.Y., Shea,T.P., Creasy,T.H., Haas,B.,
            Maiti,R., Wu,D., Peterson,J., Van Aken,S., Pai,G., Militscher,J.,
            Sellers,P., Gill,J.E., Feldblyum,T.V., Preuss,D., Lin,X.,
            Nierman,W.C., Salzberg,S.L., White,O., Venter,J.C., Fraser,C.M.,
            Kaneko,T., Nakamura,Y., Sato,S., Kato,T., Asamizu,E., Sasamoto,S.,
            Kimura,T., Idesawa,K., Kawashima,K., Kishida,Y., Kiyokawa,C.,
            Kohara,M., Matsumoto,M., Matsuno,A., Muraki,A., Nakayama,S.,
            Nakazaki,N., Shinpo,S., Takeuchi,C., Wada,T., Watanabe,A.,
            Yamada,M., Yasuda,M. and Tabata,S.
  CONSRTM   European Union Chromosome 3 Arabidopsis Sequencing Consortium;
            Institute for Genomic Research; Kazusa DNA Research Institute
  TITLE     Sequence and analysis of chromosome 3 of the plant Arabidopsis
            thaliana
  JOURNAL   Nature 408 (6814), 820-822 (2000)
   PUBMED   11130713
REFERENCE   2  (residues 1 to 422)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (19-OCT-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (residues 1 to 422)
  AUTHORS   Krishnakumar,V., Cheng,C.-Y., Chan,A.P., Schobel,S., Kim,M.,
            Ferlanti,E.S., Belyaeva,I., Rosen,B.D., Micklem,G., Miller,J.R.,
            Vaughn,M. and Town,C.D.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-MAY-2016) Plant Genomics, J. Craig Venter Institute,
            9704 Medical Center Dr, Rockville, MD 20850, USA
  REMARK    Protein update by submitter
REFERENCE   4  (residues 1 to 422)
  AUTHORS   Swarbreck,D., Lamesch,P., Wilks,C. and Huala,E.
  CONSRTM   TAIR
  TITLE     Direct Submission
  JOURNAL   Submitted (18-FEB-2011) Department of Plant Biology, Carnegie
            Institution, 260 Panama Street, Stanford, CA, USA
COMMENT     REVIEWED REFSEQ: This record has been curated by TAIR and Araport.
            The reference sequence is identical to AEE80125.
            Method: conceptual translation.
FEATURES             Location/Qualifiers
     source          1..422
                     /organism="Arabidopsis thaliana"
                     /db_xref="taxon:3702"
                     /chromosome="3"
                     /ecotype="Columbia"
     Protein         1..422
                     /product="FASCICLIN-like arabinogalactan-protein 10"
                     /calculated_mol_wt=43476
     Region          198..329
                     /region_name="Fasciclin"
                     /note="Fasciclin domain; pfam02469"
                     /db_xref="CDD:396845"
     Region          308..>399
                     /region_name="rad23"
                     /note="UV excision repair protein Rad23; TIGR00601"
                     /db_xref="CDD:273167"
     CDS             1..422
                     /gene="FLA10"
                     /locus_tag="AT3G60900"
                     /gene_synonym="FASCICLIN-like arabinogalactan-protein 10"
                     /coded_by="NM_115954.3:399..1667"
                     /inference="Similar to RNA sequence,
                     EST:INSD:ES029438.1,INSD:BP639677.1,INSD:DR254293.1,
                     INSD:ES139949.1,INSD:ES153222.1,INSD:DR254300.1,
                     INSD:ES204078.1,INSD:ES138352.1,INSD:DR254296.1,
                     INSD:ES165177.1,INSD:DR254290.1,INSD:ES001736.1,
                     INSD:ES036564.1,INSD:ES142339.1,INSD:ES148936.1,
                     INSD:BP654021.1,INSD:ES086807.1,INSD:BP592016.1,
                     INSD:ES084777.1,INSD:ES149293.1,INSD:ES081195.1,
                     INSD:BP655456.1,INSD:ES017193.1,INSD:ES120493.1,
                     INSD:ES110318.1,INSD:BP560560.2,INSD:BP837055.1,
                     INSD:DR254288.1,INSD:DR254294.1,INSD:ES042934.1,
                     INSD:ES062902.1,INSD:EL992151.1,INSD:BP655025.1,
                     INSD:ES019258.1,INSD:BP586590.1,INSD:ES093532.1,
                     INSD:ES023213.1,INSD:ES081526.1,INSD:DR254298.1,
                     INSD:BP642714.1,INSD:EL978308.1,INSD:BP659192.1,
                     INSD:ES190076.1,INSD:BP832646.2,INSD:ES215415.1,
                     INSD:ES033106.1,INSD:ES090290.1,INSD:DR254297.1,
                     INSD:DR375935.1,INSD:AV781835.1,INSD:DR254299.1,
                     INSD:DR254287.1,INSD:CB260222.1,INSD:DR254302.1,
                     INSD:ES037351.1,INSD:BP641841.1,INSD:ES138873.1,
                     INSD:EL998073.1,INSD:BX839820.1,INSD:ES203099.1,
                     INSD:ES037821.1,INSD:BP829692.1,INSD:DR254291.1,
                     INSD:ES059115.1,INSD:AU236525.1,INSD:DR254292.1,
                     INSD:BP806872.1,INSD:BX835813.1,INSD:ES137555.1,
                     INSD:BP587222.1,INSD:ES157508.1,INSD:AU227476.1,
                     INSD:EL978563.1,INSD:ES140126.1,INSD:DR254295.1,
                     INSD:EL994554.1,INSD:DR254301.1,INSD:ES214770.1,
                     INSD:ES125386.1,INSD:AV551412.1,INSD:DR254289.1,
                     INSD:ES183841.1,INSD:ES215150.1,INSD:AV539067.1,
                     INSD:ES078192.1,INSD:EL977800.1,INSD:ES182188.1,
                     INSD:ES145922.1,INSD:ES061899.1,INSD:BP638002.1,
                     INSD:DR254303.1,INSD:ES048123.1,INSD:DR254286.1,
                     INSD:ES110926.1"
                     /inference="Similar to RNA sequence,
                     mRNA:INSD:AF378882.1,INSD:BX824335.1,INSD:AY087634.1,
                     INSD:AK228467.1"
                     /note="FASCICLIN-like arabinogalactan-protein 10 (FLA10);
                     LOCATED IN: anchored to plasma membrane, plasma membrane,
                     anchored to membrane; EXPRESSED IN: 17 plant structures;
                     EXPRESSED DURING: 8 growth stages; CONTAINS InterPro
                     DOMAIN/s: FAS1 domain (InterPro:IPR000782); BEST
                     Arabidopsis thaliana protein match is: FASCICLIN-like
                     arabinogalactan protein 8 (TAIR:AT2G45470.1); Has 12874
                     Blast hits to 6768 proteins in 802 species: Archae - 107;
                     Bacteria - 3922; Metazoa - 1175; Fungi - 784; Plants -
                     2143; Viruses - 697; Other Eukaryotes - 4046 (source: NCBI
                     BLink)."
                     /db_xref="GeneID:825261"
                     /db_xref="TAIR:AT3G60900"
                     /db_xref="Araport:AT3G60900"
ORIGIN      
        1 matsraftlf aftlslltva stvsghnitq ilsdtpeyss fnnylsqtkl adeinsrtti
       61 tvlvlnngam sslagkhpls vvknalsllv lldyydplkl hqlskgttlt ttlyqttgha
      121 lgnlgfvnvt dlkggkvgfg saapgsklds sytksvkqip ynisvleina piiapgilta
      181 papssagvsn itgllekagc ktfanllvss gviktfestv ekgltvfaps deafkargvp
      241 dltnltqaev vslleyhala eykpkgslkt nkdaistlat ngagkydltt stsgdevilh
      301 tgvgpsrlad tvvdetpvvi ftvdnvllpa elfgkssspa papepvsapt ptpakspspv
      361 eapsptaasp pappvdessp egapsdspts sensnaknaa fhvnapalft alvtiaatsl
      421 ll
//
Feature
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Protein clusters for NP_191649.1

More about the FLA10 gene

  • FLA10 gene
    Also Known As: AT3G60900, FASCICLIN-li...

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